Analysis of interatomic Contacts of Structural Units in PDB entry:
7EPK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EPK entry

There is 1 chain in PDB entry 7EPK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 2LEU 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7EPK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 14Right-handed alpha
Helix 2
AA2
A
18 37Right-handed alpha
Helix 3
AA3
A
40 58Right-handed alpha
Helix 4
AA4
A
65 82Right-handed alpha
Helix 5
AA5
A
108 123Right-handed alpha
Helix 6
AA6
A
138 151Right-handed alpha
Helix 7
AA7
A
161 176Right-handed alpha
Helix 8
AA8
A
193 209Right-handed alpha
Helix 9
AA9
A
224 236Right-handed alpha
Helix 10
AB1
A
254 263Right-handed alpha
Helix 11
AB2
A
282 292Right-handed alpha
Helix 12
AB3
A
292 321Right-handed alpha
Helix 13
AB4
A
325 338Right-handed alpha
Helix 14
AB5
A
349 357Right-handed alpha
Helix 15
AB6
A
359 363Right-handed 310
Helix 16
AB7
A
366 380Right-handed alpha
Helix 17
AB8
A
381 387Right-handed alpha
Helix 18
AB9
A
388 391Right-handed 310
Helix 19
AC1
A
392 403Right-handed alpha
Helix 20
AC2
A
408 424Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7EPK.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 156first strand
Strand 2
A
127 131parallel
Strand 3
A
180 184parallel
Strand 4
A
97 102parallel
Strand 5
A
212 218parallel
Strand 6
A
240 244parallel
Strand 7
A
265 270parallel
Strand 8
A
278 280anti-parallel
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