Analysis of interatomic Contacts of Structural Units in PDB entry:
7EPV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EPV entry

There is 1 chain in PDB entry 7EPV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 12GLN 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7EPV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 37Right-handed alpha
Helix 2
AA2
A
66 74Right-handed alpha
Helix 3
AA3
A
76 84Right-handed alpha
Helix 4
AA4
A
105 109Right-handed 310
Helix 5
AA5
A
116 128Right-handed alpha
Helix 6
AA6
A
197 202Right-handed alpha
Helix 7
AA7
A
202 210Right-handed alpha
Helix 8
AA8
A
242 246Right-handed 310
Helix 9
AA9
A
255 267Right-handed alpha
Helix 10
AB1
A
271 281Right-handed alpha
Helix 11
AB2
A
310 315Right-handed alpha
Helix 12
AB3
A
323 340Right-handed alpha
Helix 13
AB4
A
345 376Right-handed alpha
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There are 4 sheets in PDB entry 7EPV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
41 45parallel
Strand 3
A
18 22parallel
Strand 4
A
163 166parallel
Strand 5
A
306 308parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
114 115anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 102first strand
Strand 2
A
89 92anti-parallel
Strand 3
A
213 218parallel
Strand 4
A
221 229anti-parallel
Strand 5
A
232 240anti-parallel
Strand 6
A
184 195anti-parallel
Strand 7
A
285 291anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 144first strand
Strand 2
A
149 153anti-parallel
Strand 3
A
156 161anti-parallel
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