Analysis of interatomic Contacts of Structural Units in PDB entry:
7EQX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EQX entry

There are 4 chains in PDB entry 7EQX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -1GLY 78
B
 PRO -1GLY 78
C
 ASP 7PHE 305
D
 ASP 7PHE 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7EQX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 30Right-handed alpha
Helix 2
AA2
A
51 65Right-handed alpha
Helix 3
AA3
B
16 30Right-handed alpha
Helix 4
AA4
B
51 53Right-handed 310
Helix 5
AA5
B
54 65Right-handed alpha
Helix 6
AA6
C
14 29Right-handed alpha
Helix 7
AA7
C
72 88Right-handed alpha
Helix 8
AA8
C
89 96Right-handed 310
Helix 9
AA9
C
108 118Right-handed alpha
Helix 10
AB1
C
137 141Right-handed 310
Helix 11
AB2
C
168 180Right-handed alpha
Helix 12
AB3
C
211 231Right-handed alpha
Helix 13
AB4
C
239 243Right-handed alpha
Helix 14
AB5
C
249 257Right-handed alpha
Helix 15
AB6
C
279 281Right-handed 310
Helix 16
AB7
C
282 305Right-handed alpha
Helix 17
AB8
D
14 29Right-handed alpha
Helix 18
AB9
D
72 88Right-handed alpha
Helix 19
AC1
D
89 96Right-handed 310
Helix 20
AC2
D
108 118Right-handed alpha
Helix 21
AC3
D
137 141Right-handed 310
Helix 22
AC4
D
168 180Right-handed alpha
Helix 23
AC5
D
211 231Right-handed alpha
Helix 24
AC6
D
239 243Right-handed alpha
Helix 25
AC7
D
249 257Right-handed alpha
Helix 26
AC8
D
279 281Right-handed 310
Helix 27
AC9
D
282 305Right-handed alpha
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There are 4 sheets in PDB entry 7EQX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
46 50anti-parallel
Strand 3
A
8 12anti-parallel
Strand 4
A
69 73anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 37first strand
Strand 2
B
46 50anti-parallel
Strand 3
B
8 12anti-parallel
Strand 4
B
69 73anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 40first strand
Strand 2
C
46 52anti-parallel
Strand 3
C
99 104anti-parallel
Strand 4
C
59 65parallel
Strand 5
C
185 193parallel
Strand 6
C
262 268parallel
Strand 7
C
197 200anti-parallel
Strand 8
C
235 238parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
33 40first strand
Strand 2
D
46 52anti-parallel
Strand 3
D
99 104anti-parallel
Strand 4
D
59 65parallel
Strand 5
D
185 193parallel
Strand 6
D
262 268parallel
Strand 7
D
197 200anti-parallel
Strand 8
D
235 238parallel
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