Analysis of interatomic Contacts of Structural Units in PDB entry:
7ESI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ESI entry

There are 3 chains in PDB entry 7ESI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
CYS 78HIS 609
B
GLU 1ALA 14
C
ASP 1PRO 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7ESI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
79 85Right-handed 310
Helix 2
AA2
A
87 99Right-handed alpha
Helix 3
AA3
A
99 104Right-handed alpha
Helix 4
AA4
A
104 109Right-handed alpha
Helix 5
AA5
A
110 118Right-handed alpha
Helix 6
AA6
A
119 137Right-handed alpha
Helix 7
AA7
A
142 162Right-handed alpha
Helix 8
AA8
A
170 184Right-handed alpha
Helix 9
AA9
A
192 209Right-handed alpha
Helix 10
AB1
A
215 226Right-handed alpha
Helix 11
AB2
A
229 232Right-handed 310
Helix 12
AB3
A
233 250Right-handed alpha
Helix 13
AB4
A
253 260Right-handed alpha
Helix 14
AB5
A
263 275Right-handed alpha
Helix 15
AB6
A
276 280Right-handed 310
Helix 16
AB7
A
284 298Right-handed alpha
Helix 17
AB8
A
299 301Right-handed 310
Helix 18
AB9
A
305 320Right-handed alpha
Helix 19
AC1
A
326 341Right-handed alpha
Helix 20
AC2
A
342 346Right-handed 310
Helix 21
AC3
A
350 360Right-handed alpha
Helix 22
AC4
A
378 401Right-handed alpha
Helix 23
AC5
A
422 435Right-handed alpha
Helix 24
AC6
A
474 488Right-handed alpha
Helix 25
AC7
A
500 514Right-handed alpha
Helix 26
AC8
A
517 526Right-handed alpha
Helix 27
AC9
A
531 537Right-handed alpha
Helix 28
AD1
A
544 563Right-handed alpha
Helix 29
AD2
A
563 576Right-handed alpha
Helix 30
AD3
A
578 593Right-handed alpha
Helix 31
AD4
A
593 609Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7ESI.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
362 367first strand
Strand 2
A
370 374anti-parallel
Strand 3
A
415 420parallel
Strand 4
A
457 461parallel
Strand 5
A
443 445anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il