Analysis of interatomic Contacts of Structural Units in PDB entry:
7ESP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7ESP entry

There are 8 chains in PDB entry 7ESP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 26	LYS 296
B	ASN 26	THR 291
C	GLU 27	GLY 295
D	PRO 24	SER 288
E	GLU 27	LYS 296
F	GLU 27	GLY 289
G	GLU 27	GLY 295
H	ASN 26	GLY 289

There are 89 helices in PDB entry 7ESP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	37	42	Right-handed alpha
Helix 2	AA2	A	70	83	Right-handed alpha
Helix 3	AA3	A	85	92	Right-handed alpha
Helix 4	AA4	A	93	100	Right-handed alpha
Helix 5	AA5	A	108	113	Right-handed alpha
Helix 6	AA6	A	149	155	Right-handed alpha
Helix 7	AA7	A	171	176	Right-handed alpha
Helix 8	AA8	A	183	197	Right-handed alpha
Helix 9	AA9	A	206	213	Right-handed alpha
Helix 10	AB1	A	223	241	Right-handed alpha
Helix 11	AB2	A	253	266	Right-handed alpha
Helix 12	AB3	B	37	42	Right-handed alpha
Helix 13	AB4	B	70	82	Right-handed alpha
Helix 14	AB5	B	85	93	Right-handed alpha
Helix 15	AB6	B	93	99	Right-handed alpha
Helix 16	AB7	B	108	113	Right-handed alpha
Helix 17	AB8	B	149	155	Right-handed alpha
Helix 18	AB9	B	171	176	Right-handed alpha
Helix 19	AC1	B	183	197	Right-handed alpha
Helix 20	AC2	B	206	213	Right-handed alpha
Helix 21	AC3	B	223	240	Right-handed alpha
Helix 22	AC4	B	253	266	Right-handed alpha
Helix 23	AC5	C	37	42	Right-handed alpha
Helix 24	AC6	C	70	83	Right-handed alpha
Helix 25	AC7	C	85	92	Right-handed alpha
Helix 26	AC8	C	93	100	Right-handed alpha
Helix 27	AC9	C	108	113	Right-handed alpha
Helix 28	AD1	C	149	156	Right-handed alpha
Helix 29	AD2	C	170	176	Right-handed alpha
Helix 30	AD3	C	183	197	Right-handed alpha
Helix 31	AD4	C	206	213	Right-handed alpha
Helix 32	AD5	C	223	240	Right-handed alpha
Helix 33	AD6	C	253	266	Right-handed alpha
Helix 34	AD7	D	37	42	Right-handed alpha
Helix 35	AD8	D	70	83	Right-handed alpha
Helix 36	AD9	D	85	93	Right-handed alpha
Helix 37	AE1	D	93	99	Right-handed alpha
Helix 38	AE2	D	108	113	Right-handed alpha
Helix 39	AE3	D	149	155	Right-handed alpha
Helix 40	AE4	D	171	176	Right-handed alpha
Helix 41	AE5	D	183	197	Right-handed alpha
Helix 42	AE6	D	206	213	Right-handed alpha
Helix 43	AE7	D	223	240	Right-handed alpha
Helix 44	AE8	D	256	266	Right-handed alpha
Helix 45	AE9	E	37	42	Right-handed alpha
Helix 46	AF1	E	70	82	Right-handed alpha
Helix 47	AF2	E	85	92	Right-handed alpha
Helix 48	AF3	E	93	99	Right-handed alpha
Helix 49	AF4	E	108	113	Right-handed alpha
Helix 50	AF5	E	149	157	Right-handed alpha
Helix 51	AF6	E	171	176	Right-handed alpha
Helix 52	AF7	E	183	197	Right-handed alpha
Helix 53	AF8	E	206	213	Right-handed alpha
Helix 54	AF9	E	223	240	Right-handed alpha
Helix 55	AG1	E	256	266	Right-handed alpha
Helix 56	AG2	F	37	42	Right-handed alpha
Helix 57	AG3	F	70	83	Right-handed alpha
Helix 58	AG4	F	85	93	Right-handed alpha
Helix 59	AG5	F	93	99	Right-handed alpha
Helix 60	AG6	F	108	113	Right-handed alpha
Helix 61	AG7	F	149	155	Right-handed alpha
Helix 62	AG8	F	171	176	Right-handed alpha
Helix 63	AG9	F	183	197	Right-handed alpha
Helix 64	AH1	F	206	213	Right-handed alpha
Helix 65	AH2	F	223	240	Right-handed alpha
Helix 66	AH3	F	253	266	Right-handed alpha
Helix 67	AH4	G	37	42	Right-handed alpha
Helix 68	AH5	G	70	82	Right-handed alpha
Helix 69	AH6	G	85	92	Right-handed alpha
Helix 70	AH7	G	93	100	Right-handed alpha
Helix 71	AH8	G	108	113	Right-handed alpha
Helix 72	AH9	G	149	157	Right-handed alpha
Helix 73	AI1	G	171	176	Right-handed alpha
Helix 74	AI2	G	183	197	Right-handed alpha
Helix 75	AI3	G	206	213	Right-handed alpha
Helix 76	AI4	G	223	241	Right-handed alpha
Helix 77	AI5	G	256	266	Right-handed alpha
Helix 78	AI6	H	37	42	Right-handed alpha
Helix 79	AI7	H	43	48	Right-handed 310
Helix 80	AI8	H	70	83	Right-handed alpha
Helix 81	AI9	H	85	93	Right-handed alpha
Helix 82	AJ1	H	93	99	Right-handed alpha
Helix 83	AJ2	H	108	113	Right-handed alpha
Helix 84	AJ3	H	149	156	Right-handed alpha
Helix 85	AJ4	H	171	176	Right-handed alpha
Helix 86	AJ5	H	183	197	Right-handed alpha
Helix 87	AJ6	H	206	213	Right-handed alpha
Helix 88	AJ7	H	223	241	Right-handed alpha
Helix 89	AJ8	H	256	266	Right-handed alpha

There are 16 sheets in PDB entry 7ESP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	61	first strand
Strand 2	A	64	69	anti-parallel
Strand 3	A	101	102	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	180	first strand
Strand 2	A	161	164	parallel
Strand 3	A	201	204	parallel
Strand 4	A	243	248	parallel
Strand 5	A	138	143	parallel
Strand 6	A	270	275	parallel
Strand 7	A	278	285	anti-parallel
Strand 8	A	290	294	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	61	first strand
Strand 2	B	64	69	anti-parallel
Strand 3	B	101	102	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	180	first strand
Strand 2	B	161	164	parallel
Strand 3	B	201	204	parallel
Strand 4	B	243	248	parallel
Strand 5	B	138	143	parallel
Strand 6	B	270	275	parallel
Strand 7	B	278	284	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	61	first strand
Strand 2	C	64	69	anti-parallel
Strand 3	C	101	102	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	180	first strand
Strand 2	C	161	164	parallel
Strand 3	C	201	204	parallel
Strand 4	C	243	248	parallel
Strand 5	C	138	143	parallel
Strand 6	C	270	275	parallel
Strand 7	C	278	285	anti-parallel
Strand 8	C	290	294	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	61	first strand
Strand 2	D	64	69	anti-parallel
Strand 3	D	101	102	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	178	180	first strand
Strand 2	D	161	164	parallel
Strand 3	D	201	204	parallel
Strand 4	D	243	248	parallel
Strand 5	D	138	143	parallel
Strand 6	D	270	275	parallel
Strand 7	D	278	284	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	61	first strand
Strand 2	E	64	69	anti-parallel
Strand 3	E	101	102	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	178	180	first strand
Strand 2	E	161	164	parallel
Strand 3	E	201	204	parallel
Strand 4	E	243	248	parallel
Strand 5	E	138	143	parallel
Strand 6	E	270	275	parallel
Strand 7	E	278	285	anti-parallel
Strand 8	E	290	294	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	61	first strand
Strand 2	F	64	69	anti-parallel
Strand 3	F	101	102	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	178	180	first strand
Strand 2	F	161	164	parallel
Strand 3	F	201	204	parallel
Strand 4	F	243	248	parallel
Strand 5	F	138	143	parallel
Strand 6	F	270	275	parallel
Strand 7	F	278	284	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	61	first strand
Strand 2	G	64	69	anti-parallel
Strand 3	G	101	102	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	178	180	first strand
Strand 2	G	161	164	parallel
Strand 3	G	201	204	parallel
Strand 4	G	243	248	parallel
Strand 5	G	138	143	parallel
Strand 6	G	270	275	parallel
Strand 7	G	278	286	anti-parallel
Strand 8	G	289	294	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	56	61	first strand
Strand 2	H	64	69	anti-parallel
Strand 3	H	101	102	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	178	180	first strand
Strand 2	H	161	164	parallel
Strand 3	H	201	204	parallel
Strand 4	H	243	248	parallel
Strand 5	H	138	143	parallel
Strand 6	H	270	275	parallel
Strand 7	H	278	284	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7ESP

Analysis of interatomic Contacts of Structural Units in PDB entry:
7ESP