Analysis of interatomic Contacts of Structural Units in PDB entry:
7ETS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7ETS entry

There are 2 chains in PDB entry 7ETS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 13GLU 238
B
 ASP 13GLU 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7ETS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed alpha
Helix 2
AA2
A
26 32Right-handed alpha
Helix 3
AA3
A
72 76Right-handed 310
Helix 4
AA4
A
120 130Right-handed alpha
Helix 5
AA5
A
130 158Right-handed alpha
Helix 6
AA6
A
159 176Right-handed alpha
Helix 7
AA7
A
190 199Right-handed alpha
Helix 8
AA8
A
201 215Right-handed alpha
Helix 9
AA9
A
229 238Right-handed alpha
Helix 10
AB1
B
17 23Right-handed alpha
Helix 11
AB2
B
26 32Right-handed alpha
Helix 12
AB3
B
120 130Right-handed alpha
Helix 13
AB4
B
130 158Right-handed alpha
Helix 14
AB5
B
159 176Right-handed alpha
Helix 15
AB6
B
190 199Right-handed alpha
Helix 16
AB7
B
201 215Right-handed alpha
Helix 17
AB8
B
229 238Right-handed alpha
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There are 6 sheets in PDB entry 7ETS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
113 119anti-parallel
Strand 3
A
57 63anti-parallel
Strand 4
A
88 89anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
105 108anti-parallel
Strand 3
A
66 69anti-parallel
Strand 4
A
81 83anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 179first strand
Strand 2
A
182 185anti-parallel
Strand 3
A
224 227anti-parallel
Strand 4
A
218 221anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 42first strand
Strand 2
B
113 119anti-parallel
Strand 3
B
57 63anti-parallel
Strand 4
B
88 89anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
105 108anti-parallel
Strand 3
B
66 71anti-parallel
Strand 4
B
77 83anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 179first strand
Strand 2
B
182 185anti-parallel
Strand 3
B
224 227anti-parallel
Strand 4
B
218 221anti-parallel
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