Analysis of interatomic Contacts of Structural Units in PDB entry:
7EVP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7EVP entry

There are 4 chains in PDB entry 7EVP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	TYR 377
C	LEU 12	GLU 54
B	MET 1	TYR 377
D	LEU 12	GLU 54

There are 22 helices in PDB entry 7EVP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	16	Right-handed alpha
Helix 2	AA2	A	80	88	Right-handed alpha
Helix 3	AA3	A	120	124	Right-handed 310
Helix 4	AA4	A	140	151	Right-handed alpha
Helix 5	AA5	A	206	208	Right-handed 310
Helix 6	AA6	A	252	256	Right-handed 310
Helix 7	AA7	A	268	279	Right-handed alpha
Helix 8	AA8	A	280	284	Right-handed 310
Helix 9	AA9	A	331	340	Right-handed alpha
Helix 10	AB1	C	13	25	Right-handed alpha
Helix 11	AB2	C	32	54	Right-handed alpha
Helix 12	AB3	B	8	16	Right-handed alpha
Helix 13	AB4	B	80	88	Right-handed alpha
Helix 14	AB5	B	120	124	Right-handed 310
Helix 15	AB6	B	140	151	Right-handed alpha
Helix 16	AB7	B	206	208	Right-handed 310
Helix 17	AB8	B	252	256	Right-handed 310
Helix 18	AB9	B	268	279	Right-handed alpha
Helix 19	AC1	B	280	284	Right-handed 310
Helix 20	AC2	B	331	340	Right-handed alpha
Helix 21	AC3	D	13	25	Right-handed alpha
Helix 22	AC4	D	32	54	Right-handed alpha

There are 18 sheets in PDB entry 7EVP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	72	first strand
Strand 2	A	3	7	anti-parallel
Strand 3	A	94	98	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	33	38	anti-parallel
Strand 4	A	74	79	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	42	48	anti-parallel
Strand 3	A	52	54	anti-parallel
Strand 4	A	241	243	anti-parallel
Strand 5	A	230	234	anti-parallel
Strand 6	A	221	226	anti-parallel
Strand 7	A	135	139	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	62	first strand
Strand 2	A	65	66	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	112	115	anti-parallel
Strand 3	B	309	312	anti-parallel
Strand 4	B	302	305	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	204	first strand
Strand 2	A	165	170	anti-parallel
Strand 3	A	174	178	anti-parallel
Strand 4	A	184	191	anti-parallel
Strand 5	A	368	371	anti-parallel
Strand 6	A	357	361	anti-parallel
Strand 7	A	345	350	anti-parallel
Strand 8	A	262	263	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	204	first strand
Strand 2	A	165	170	anti-parallel
Strand 3	A	174	178	anti-parallel
Strand 4	A	184	191	anti-parallel
Strand 5	A	368	371	anti-parallel
Strand 6	A	357	361	anti-parallel
Strand 7	A	345	350	anti-parallel
Strand 8	A	266	267	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	291	first strand
Strand 2	A	328	330	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	298	299	first strand
Strand 2	A	315	316	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	305	first strand
Strand 2	A	309	312	anti-parallel
Strand 3	B	112	115	anti-parallel
Strand 4	B	108	109	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	72	first strand
Strand 2	B	3	7	anti-parallel
Strand 3	B	94	98	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	59	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	33	38	anti-parallel
Strand 4	B	74	79	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	59	first strand
Strand 2	B	42	48	anti-parallel
Strand 3	B	52	54	anti-parallel
Strand 4	B	241	243	anti-parallel
Strand 5	B	230	234	anti-parallel
Strand 6	B	221	226	anti-parallel
Strand 7	B	135	139	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	62	first strand
Strand 2	B	65	66	anti-parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	204	first strand
Strand 2	B	165	170	anti-parallel
Strand 3	B	174	178	anti-parallel
Strand 4	B	184	191	anti-parallel
Strand 5	B	368	371	anti-parallel
Strand 6	B	357	361	anti-parallel
Strand 7	B	345	350	anti-parallel
Strand 8	B	262	263	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	204	first strand
Strand 2	B	165	170	anti-parallel
Strand 3	B	174	178	anti-parallel
Strand 4	B	184	191	anti-parallel
Strand 5	B	368	371	anti-parallel
Strand 6	B	357	361	anti-parallel
Strand 7	B	345	350	anti-parallel
Strand 8	B	266	267	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	291	first strand
Strand 2	B	328	330	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	299	first strand
Strand 2	B	315	316	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7EVP

Analysis of interatomic Contacts of Structural Units in PDB entry:
7EVP