Analysis of interatomic Contacts of Structural Units in PDB entry:
7EWM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EWM entry

There are 3 chains in PDB entry 7EWM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 187TYR 458
B
 GLY 6LYS 423
C
 ASP 32GLN 89
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7EWM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
214 232Right-handed alpha
Helix 2
AA2
A
235 253Right-handed alpha
Helix 3
AA3
A
257 274Right-handed alpha
Helix 4
AA4
A
276 292Right-handed alpha
Helix 5
AA5
A
300 315Right-handed alpha
Helix 6
AA6
A
317 331Right-handed alpha
Helix 7
AA7
A
333 338Right-handed alpha
Helix 8
AA8
A
339 354Right-handed alpha
Helix 9
AA9
A
356 363Right-handed alpha
Helix 10
AB1
A
368 376Right-handed alpha
Helix 11
AB2
A
378 394Right-handed alpha
Helix 12
AB3
A
399 406Right-handed alpha
Helix 13
AB4
A
410 420Right-handed alpha
Helix 14
AB5
A
421 422Right-handed 310
Helix 15
AB6
A
423 425Right-handed 310
Helix 16
AB7
A
446 458Right-handed alpha
Helix 17
AB8
B
7 11Right-handed alpha
Helix 18
AB9
B
15 23Right-handed alpha
Helix 19
AC1
B
43 69Right-handed alpha
Helix 20
AC2
B
75 98Right-handed alpha
Helix 21
AC3
B
101 103Right-handed 310
Helix 22
AC4
B
104 121Right-handed alpha
Helix 23
AC5
B
129 146Right-handed alpha
Helix 24
AC6
B
155 158Right-handed 310
Helix 25
AC7
B
159 174Right-handed alpha
Helix 26
AC8
B
176 193Right-handed alpha
Helix 27
AC9
B
198 207Right-handed 310
Helix 28
AD1
B
208 225Right-handed alpha
Helix 29
AD2
B
228 242Right-handed alpha
Helix 30
AD3
B
256 275Right-handed alpha
Helix 31
AD4
B
283 291Right-handed alpha
Helix 32
AD5
B
293 310Right-handed alpha
Helix 33
AD6
B
311 322Right-handed alpha
Helix 34
AD7
B
322 329Right-handed alpha
Helix 35
AD8
B
331 353Right-handed alpha
Helix 36
AD9
B
364 366Right-handed 310
Helix 37
AE1
B
380 397Right-handed alpha
Helix 38
AE2
C
44 48Right-handed 310
Helix 39
AE3
C
71 88Right-handed alpha
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There are 3 sheets in PDB entry 7EWM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 398first strand
Strand 2
A
440 445anti-parallel
Strand 3
A
427 432anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 279first strand
Strand 2
C
60 61anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 362first strand
Strand 2
B
410 413anti-parallel
Strand 3
B
402 405anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il