Analysis of interatomic Contacts of Structural Units in PDB entry:
7EXP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EXP entry

There are 2 chains in PDB entry 7EXP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 85HIS 719
B
 THR 85GLU 717
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 7EXP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
108 120Right-handed alpha
Helix 2
AA2
A
125 146Right-handed alpha
Helix 3
AA3
A
179 187Right-handed alpha
Helix 4
AA4
A
193 201Right-handed alpha
Helix 5
AA5
A
207 212Right-handed alpha
Helix 6
AA6
A
218 225Right-handed 310
Helix 7
AA7
A
274 280Right-handed 310
Helix 8
AA8
A
281 294Right-handed alpha
Helix 9
AA9
A
312 316Right-handed 310
Helix 10
AB1
A
317 321Right-handed 310
Helix 11
AB2
A
322 335Right-handed alpha
Helix 12
AB3
A
396 400Right-handed 310
Helix 13
AB4
A
423 448Right-handed alpha
Helix 14
AB5
A
448 470Right-handed alpha
Helix 15
AB6
A
472 481Right-handed alpha
Helix 16
AB7
A
497 504Right-handed alpha
Helix 17
AB8
A
519 525Right-handed alpha
Helix 18
AB9
A
546 555Right-handed alpha
Helix 19
AC1
A
594 605Right-handed alpha
Helix 20
AC2
A
629 638Right-handed alpha
Helix 21
AC3
A
663 675Right-handed alpha
Helix 22
AC4
A
676 695Right-handed alpha
Helix 23
AC5
A
701 703Right-handed 310
Helix 24
AC6
A
704 716Right-handed alpha
Helix 25
AC7
B
108 119Right-handed alpha
Helix 26
AC8
B
125 146Right-handed alpha
Helix 27
AC9
B
179 186Right-handed alpha
Helix 28
AD1
B
193 199Right-handed alpha
Helix 29
AD2
B
218 225Right-handed 310
Helix 30
AD3
B
274 280Right-handed 310
Helix 31
AD4
B
281 293Right-handed alpha
Helix 32
AD5
B
312 316Right-handed 310
Helix 33
AD6
B
317 321Right-handed 310
Helix 34
AD7
B
322 335Right-handed alpha
Helix 35
AD8
B
396 400Right-handed 310
Helix 36
AD9
B
422 448Right-handed alpha
Helix 37
AE1
B
448 470Right-handed alpha
Helix 38
AE2
B
472 481Right-handed alpha
Helix 39
AE3
B
497 504Right-handed alpha
Helix 40
AE4
B
519 525Right-handed alpha
Helix 41
AE5
B
526 534Right-handed alpha
Helix 42
AE6
B
546 555Right-handed alpha
Helix 43
AE7
B
565 574Right-handed alpha
Helix 44
AE8
B
584 588Right-handed 310
Helix 45
AE9
B
590 605Right-handed alpha
Helix 46
AF1
B
629 638Right-handed alpha
Helix 47
AF2
B
663 676Right-handed alpha
Helix 48
AF3
B
676 695Right-handed alpha
Helix 49
AF4
B
703 716Right-handed alpha
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There are 10 sheets in PDB entry 7EXP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 104first strand
Strand 2
B
253 260anti-parallel
Strand 3
B
243 248anti-parallel
Strand 4
B
227 235anti-parallel
Strand 5
B
265 272anti-parallel
Strand 6
B
168 173anti-parallel
Strand 7
B
158 163anti-parallel
Strand 8
B
300 302parallel
Strand 9
B
305 306anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
B
189 190parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 306first strand
Strand 2
A
300 302anti-parallel
Strand 3
A
158 163parallel
Strand 4
A
168 173anti-parallel
Strand 5
A
265 272anti-parallel
Strand 6
A
227 235anti-parallel
Strand 7
A
243 248anti-parallel
Strand 8
A
253 260anti-parallel
Strand 9
B
95 104anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
B
106 107parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 348first strand
Strand 2
A
354 361anti-parallel
Strand 3
A
403 407anti-parallel
Strand 4
A
378 382parallel
Strand 5
A
385 388anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 487first strand
Strand 2
A
539 542anti-parallel
Strand 3
A
511 516parallel
Strand 4
A
560 564parallel
Strand 5
A
556 557anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
611 614first strand
Strand 2
A
656 659parallel
Strand 3
A
623 626anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
340 348first strand
Strand 2
B
354 361anti-parallel
Strand 3
B
403 407anti-parallel
Strand 4
B
378 382parallel
Strand 5
B
385 386anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
486 487first strand
Strand 2
B
539 542anti-parallel
Strand 3
B
511 516parallel
Strand 4
B
560 564parallel
Strand 5
B
556 557anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
611 614first strand
Strand 2
B
656 659parallel
Strand 3
B
623 626anti-parallel
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