Analysis of interatomic Contacts of Structural Units in PDB entry:
7EXX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EXX entry

There are 2 chains in PDB entry 7EXX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2ASP 57
A
 LYS 59VAL 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7EXX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 43Right-handed alpha
Helix 2
AA2
A
50 66Right-handed alpha
Helix 3
AA3
A
68 79Right-handed alpha
Helix 4
AA4
A
81 87Right-handed alpha
Helix 5
AA5
A
88 96Right-handed 310
Helix 6
AA6
A
108 120Right-handed alpha
Helix 7
AA7
A
136 150Right-handed alpha
Helix 8
AA8
A
165 181Right-handed alpha
Helix 9
AA9
A
182 209Right-handed alpha
Helix 10
AB1
A
210 212Right-handed 310
Helix 11
AB2
A
235 241Right-handed alpha
Helix 12
AB3
A
242 251Right-handed alpha
Helix 13
AB4
A
252 263Right-handed alpha
Helix 14
AB5
A
272 283Right-handed alpha
Helix 15
AB6
A
288 302Right-handed alpha
Helix 16
AB7
A
317 332Right-handed alpha
Helix 17
AB8
A
338 355Right-handed alpha
Helix 18
AB9
A
364 366Right-handed 310
Helix 19
AC1
A
373 386Right-handed alpha
Helix 20
AC2
A
393 403Right-handed alpha
Helix 21
AC3
A
408 423Right-handed alpha
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There are 3 sheets in PDB entry 7EXX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
98 100anti-parallel
Strand 3
A
44 47parallel
Strand 4
A
151 152anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 226first strand
Strand 2
A
368 372parallel
Strand 3
A
360 362anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 392first strand
Strand 2
A
436 438anti-parallel
Strand 3
A
425 426anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il