Analysis of interatomic Contacts of Structural Units in PDB entry:
7EZB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7EZB entry

There are 2 chains in PDB entry 7EZB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 182
B
 MET 1MET 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7EZB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 29Right-handed alpha
Helix 2
AA2
A
51 53Right-handed 310
Helix 3
AA3
A
74 79Right-handed alpha
Helix 4
AA4
A
92 98Right-handed alpha
Helix 5
AA5
A
98 111Right-handed alpha
Helix 6
AA6
A
125 129Right-handed 310
Helix 7
AA7
A
132 143Right-handed alpha
Helix 8
AA8
A
157 180Right-handed alpha
Helix 9
AA9
B
18 29Right-handed alpha
Helix 10
AB1
B
92 98Right-handed alpha
Helix 11
AB2
B
98 111Right-handed alpha
Helix 12
AB3
B
132 143Right-handed alpha
Helix 13
AB4
B
157 179Right-handed alpha
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There are 2 sheets in PDB entry 7EZB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 50first strand
Strand 2
A
55 63anti-parallel
Strand 3
A
3 12parallel
Strand 4
A
81 89parallel
Strand 5
A
116 121parallel
Strand 6
A
146 150parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 50first strand
Strand 2
B
55 63anti-parallel
Strand 3
B
3 12parallel
Strand 4
B
81 89parallel
Strand 5
B
116 121parallel
Strand 6
B
146 149parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il