Analysis of interatomic Contacts of Structural Units in PDB entry:
7F03


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F03 entry

There are 6 chains in PDB entry 7F03 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET -1THR 200
B
 MET 1GLN 220
C
 GLN 7GLU 237
D
 MET 1ALA 55
E
 MET -1THR 200
F
 MET 1GLN 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7F03. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 48Right-handed alpha
Helix 2
AA2
A
65 69Right-handed alpha
Helix 3
AA3
A
90 98Right-handed alpha
Helix 4
AA4
A
105 114Right-handed alpha
Helix 5
AA5
A
123 127Right-handed 310
Helix 6
AA6
A
130 138Right-handed alpha
Helix 7
AA7
A
138 143Right-handed alpha
Helix 8
AA8
A
158 176Right-handed alpha
Helix 9
AA9
A
190 192Right-handed 310
Helix 10
AB1
B
2 15Right-handed alpha
Helix 11
AB2
B
17 21Right-handed 310
Helix 12
AB3
B
22 34Right-handed alpha
Helix 13
AB4
B
35 40Right-handed alpha
Helix 14
AB5
B
42 76Right-handed alpha
Helix 15
AB6
B
88 111Right-handed alpha
Helix 16
AB7
B
111 119Right-handed alpha
Helix 17
AB8
B
122 136Right-handed alpha
Helix 18
AB9
B
136 144Right-handed alpha
Helix 19
AC1
B
144 154Right-handed alpha
Helix 20
AC2
B
158 165Right-handed 310
Helix 21
AC3
B
169 185Right-handed alpha
Helix 22
AC4
B
189 205Right-handed alpha
Helix 23
AC5
B
206 220Right-handed alpha
Helix 24
AC6
C
13 40Right-handed alpha
Helix 25
AC7
C
50 55Right-handed 310
Helix 26
AC8
C
56 84Right-handed alpha
Helix 27
AC9
C
86 120Right-handed alpha
Helix 28
AD1
C
126 147Right-handed alpha
Helix 29
AD2
C
156 185Right-handed alpha
Helix 30
AD3
C
195 198Right-handed 310
Helix 31
AD4
C
199 229Right-handed alpha
Helix 32
AD5
C
232 236Right-handed 310
Helix 33
AD6
D
17 53Right-handed alpha
Helix 34
AD7
E
39 48Right-handed alpha
Helix 35
AD8
E
90 97Right-handed alpha
Helix 36
AD9
E
106 115Right-handed alpha
Helix 37
AE1
E
123 127Right-handed 310
Helix 38
AE2
E
130 138Right-handed alpha
Helix 39
AE3
E
139 142Right-handed 310
Helix 40
AE4
E
158 177Right-handed alpha
Helix 41
AE5
F
2 17Right-handed alpha
Helix 42
AE6
F
21 39Right-handed alpha
Helix 43
AE7
F
42 66Right-handed alpha
Helix 44
AE8
F
67 69Right-handed 310
Helix 45
AE9
F
70 75Right-handed alpha
Helix 46
AF1
F
88 111Right-handed alpha
Helix 47
AF2
F
111 119Right-handed alpha
Helix 48
AF3
F
122 152Right-handed alpha
Helix 49
AF4
F
160 164Right-handed 310
Helix 50
AF5
F
166 168Right-handed 310
Helix 51
AF6
F
169 185Right-handed alpha
Helix 52
AF7
F
189 220Right-handed alpha
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There are 5 sheets in PDB entry 7F03. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 23first strand
Strand 2
A
3 11anti-parallel
Strand 3
A
57 60anti-parallel
Strand 4
A
63 64anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
148 151parallel
Strand 3
A
178 182parallel
Strand 4
A
28 33parallel
Strand 5
A
194 198parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
14 20first strand
Strand 2
E
2 11anti-parallel
Strand 3
E
23 24anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
14 20first strand
Strand 2
E
2 11anti-parallel
Strand 3
E
55 60anti-parallel
Strand 4
E
63 64anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
77 79first strand
Strand 2
E
147 151parallel
Strand 3
E
178 182parallel
Strand 4
E
29 33parallel
Strand 5
E
195 198parallel
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