Analysis of interatomic Contacts of Structural Units in PDB entry:
7F05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F05 entry

There are 4 chains in PDB entry 7F05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 20LEU 366
C
 SER 19GLU 373
B
 ASN 24THR 372
D
 GLU 20ASN 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 7F05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 40Right-handed 310
Helix 2
AA2
A
41 47Right-handed alpha
Helix 3
AA3
A
65 84Right-handed alpha
Helix 4
AA4
A
85 87Right-handed 310
Helix 5
AA5
A
99 107Right-handed alpha
Helix 6
AA6
A
130 143Right-handed alpha
Helix 7
AA7
A
151 160Right-handed alpha
Helix 8
AA8
A
176 189Right-handed alpha
Helix 9
AA9
A
200 207Right-handed alpha
Helix 10
AB1
A
233 244Right-handed alpha
Helix 11
AB2
A
256 262Right-handed alpha
Helix 12
AB3
A
278 295Right-handed alpha
Helix 13
AB4
A
307 313Right-handed 310
Helix 14
AB5
A
314 323Right-handed alpha
Helix 15
AB6
A
354 366Right-handed alpha
Helix 16
AB7
C
63 84Right-handed alpha
Helix 17
AB8
C
85 87Right-handed 310
Helix 18
AB9
C
99 107Right-handed alpha
Helix 19
AC1
C
130 143Right-handed alpha
Helix 20
AC2
C
151 160Right-handed alpha
Helix 21
AC3
C
176 189Right-handed alpha
Helix 22
AC4
C
200 207Right-handed alpha
Helix 23
AC5
C
233 244Right-handed alpha
Helix 24
AC6
C
256 262Right-handed alpha
Helix 25
AC7
C
278 295Right-handed alpha
Helix 26
AC8
C
307 313Right-handed 310
Helix 27
AC9
C
314 323Right-handed alpha
Helix 28
AD1
C
354 367Right-handed alpha
Helix 29
AD2
B
41 47Right-handed alpha
Helix 30
AD3
B
66 84Right-handed alpha
Helix 31
AD4
B
85 87Right-handed 310
Helix 32
AD5
B
99 107Right-handed alpha
Helix 33
AD6
B
130 143Right-handed alpha
Helix 34
AD7
B
151 160Right-handed alpha
Helix 35
AD8
B
176 189Right-handed alpha
Helix 36
AD9
B
200 207Right-handed alpha
Helix 37
AE1
B
233 244Right-handed alpha
Helix 38
AE2
B
256 262Right-handed alpha
Helix 39
AE3
B
278 295Right-handed alpha
Helix 40
AE4
B
307 313Right-handed 310
Helix 41
AE5
B
314 323Right-handed alpha
Helix 42
AE6
B
354 367Right-handed alpha
Helix 43
AE7
D
41 48Right-handed alpha
Helix 44
AE8
D
67 84Right-handed alpha
Helix 45
AE9
D
85 87Right-handed 310
Helix 46
AF1
D
99 107Right-handed alpha
Helix 47
AF2
D
130 143Right-handed alpha
Helix 48
AF3
D
151 160Right-handed alpha
Helix 49
AF4
D
176 187Right-handed alpha
Helix 50
AF5
D
200 207Right-handed alpha
Helix 51
AF6
D
233 244Right-handed alpha
Helix 52
AF7
D
256 262Right-handed alpha
Helix 53
AF8
D
278 295Right-handed alpha
Helix 54
AF9
D
307 313Right-handed 310
Helix 55
AG1
D
314 323Right-handed alpha
Helix 56
AG2
D
354 367Right-handed alpha
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There are 12 sheets in PDB entry 7F05. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
A
89 95parallel
Strand 3
A
51 57parallel
Strand 4
A
113 118anti-parallel
Strand 5
A
121 125anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
194 198parallel
Strand 3
A
166 170parallel
Strand 4
A
214 217anti-parallel
Strand 5
A
225 226anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 251first strand
Strand 2
A
303 306parallel
Strand 3
A
268 273parallel
Strand 4
A
330 335anti-parallel
Strand 5
A
340 343anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 36first strand
Strand 2
C
89 95parallel
Strand 3
C
51 57parallel
Strand 4
C
113 118anti-parallel
Strand 5
C
121 125anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 148first strand
Strand 2
C
194 198parallel
Strand 3
C
166 170parallel
Strand 4
C
214 217anti-parallel
Strand 5
C
225 226anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
249 251first strand
Strand 2
C
303 306parallel
Strand 3
C
268 273parallel
Strand 4
C
330 335anti-parallel
Strand 5
C
340 343anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 36first strand
Strand 2
B
89 95parallel
Strand 3
B
51 57parallel
Strand 4
B
113 118anti-parallel
Strand 5
B
121 125anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 148first strand
Strand 2
B
194 198parallel
Strand 3
B
166 170parallel
Strand 4
B
214 217anti-parallel
Strand 5
B
225 226anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 251first strand
Strand 2
B
303 306parallel
Strand 3
B
268 273parallel
Strand 4
B
330 335anti-parallel
Strand 5
B
340 343anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 36first strand
Strand 2
D
89 95parallel
Strand 3
D
51 57parallel
Strand 4
D
113 118anti-parallel
Strand 5
D
121 125anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
146 148first strand
Strand 2
D
194 198parallel
Strand 3
D
166 170parallel
Strand 4
D
214 217anti-parallel
Strand 5
D
225 226anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
249 251first strand
Strand 2
D
303 306parallel
Strand 3
D
268 273parallel
Strand 4
D
330 335anti-parallel
Strand 5
D
340 343anti-parallel
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