Analysis of interatomic Contacts of Structural Units in PDB entry:
7F0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F0C entry

There are 2 chains in PDB entry 7F0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LEU 283
C
 SER 6SER 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7F0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
47 49Right-handed 310
Helix 3
AA3
A
50 66Right-handed alpha
Helix 4
AA4
A
98 104Right-handed alpha
Helix 5
AA5
A
107 124Right-handed alpha
Helix 6
AA6
A
126 131Right-handed alpha
Helix 7
AA7
A
140 153Right-handed alpha
Helix 8
AA8
A
154 157Right-handed 310
Helix 9
AA9
A
158 175Right-handed alpha
Helix 10
AB1
A
188 190Right-handed 310
Helix 11
AB2
A
216 229Right-handed alpha
Helix 12
AB3
A
229 241Right-handed alpha
Helix 13
AB4
A
242 244Right-handed 310
Helix 14
AB5
A
245 254Right-handed alpha
Helix 15
AB6
A
255 268Right-handed alpha
Helix 16
AB7
A
269 278Right-handed alpha
Helix 17
AB8
A
279 281Right-handed 310
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There are 3 sheets in PDB entry 7F0C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
30 34anti-parallel
Strand 3
A
38 43anti-parallel
Strand 4
A
87 90anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
213 215anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
200 206anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il