Analysis of interatomic Contacts of Structural Units in PDB entry:
7F0E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F0E entry

There are 4 chains in PDB entry 7F0E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 16	SER 389
B	HIS 15	VAL 390
C	LEU 17	VAL 390
D	ARG 13	SER 389

There are 59 helices in PDB entry 7F0E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	45	Right-handed alpha
Helix 2	AA2	A	50	64	Right-handed alpha
Helix 3	AA3	A	74	81	Right-handed alpha
Helix 4	AA4	A	82	86	Right-handed 310
Helix 5	AA5	A	91	119	Right-handed alpha
Helix 6	AA6	A	121	125	Right-handed 310
Helix 7	AA7	A	140	150	Right-handed alpha
Helix 8	AA8	A	166	182	Right-handed alpha
Helix 9	AA9	A	207	216	Right-handed alpha
Helix 10	AB1	A	271	289	Right-handed alpha
Helix 11	AB2	A	307	319	Right-handed alpha
Helix 12	AB3	A	325	336	Right-handed alpha
Helix 13	AB4	A	338	340	Right-handed 310
Helix 14	AB5	A	341	357	Right-handed alpha
Helix 15	AB6	B	36	45	Right-handed alpha
Helix 16	AB7	B	50	64	Right-handed alpha
Helix 17	AB8	B	74	81	Right-handed alpha
Helix 18	AB9	B	81	86	Right-handed alpha
Helix 19	AC1	B	91	119	Right-handed alpha
Helix 20	AC2	B	121	125	Right-handed 310
Helix 21	AC3	B	140	150	Right-handed alpha
Helix 22	AC4	B	166	182	Right-handed alpha
Helix 23	AC5	B	206	216	Right-handed alpha
Helix 24	AC6	B	271	289	Right-handed alpha
Helix 25	AC7	B	307	319	Right-handed alpha
Helix 26	AC8	B	325	336	Right-handed alpha
Helix 27	AC9	B	340	358	Right-handed alpha
Helix 28	AD1	C	36	45	Right-handed alpha
Helix 29	AD2	C	50	64	Right-handed alpha
Helix 30	AD3	C	74	79	Right-handed alpha
Helix 31	AD4	C	81	86	Right-handed 310
Helix 32	AD5	C	91	119	Right-handed alpha
Helix 33	AD6	C	121	125	Right-handed 310
Helix 34	AD7	C	140	150	Right-handed alpha
Helix 35	AD8	C	166	182	Right-handed alpha
Helix 36	AD9	C	207	216	Right-handed alpha
Helix 37	AE1	C	271	289	Right-handed alpha
Helix 38	AE2	C	290	292	Right-handed 310
Helix 39	AE3	C	307	319	Right-handed alpha
Helix 40	AE4	C	321	324	Right-handed 310
Helix 41	AE5	C	325	336	Right-handed alpha
Helix 42	AE6	C	338	340	Right-handed 310
Helix 43	AE7	C	341	357	Right-handed alpha
Helix 44	AE8	D	36	45	Right-handed alpha
Helix 45	AE9	D	50	64	Right-handed alpha
Helix 46	AF1	D	74	81	Right-handed alpha
Helix 47	AF2	D	82	86	Right-handed 310
Helix 48	AF3	D	91	119	Right-handed alpha
Helix 49	AF4	D	121	125	Right-handed 310
Helix 50	AF5	D	140	150	Right-handed alpha
Helix 51	AF6	D	166	182	Right-handed alpha
Helix 52	AF7	D	194	198	Right-handed 310
Helix 53	AF8	D	206	216	Right-handed alpha
Helix 54	AF9	D	271	289	Right-handed alpha
Helix 55	AG1	D	290	292	Right-handed 310
Helix 56	AG2	D	307	319	Right-handed alpha
Helix 57	AG3	D	321	324	Right-handed 310
Helix 58	AG4	D	325	336	Right-handed alpha
Helix 59	AG5	D	340	357	Right-handed alpha

There are 16 sheets in PDB entry 7F0E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	156	161	first strand
Strand 2	A	127	132	parallel
Strand 3	A	187	193	parallel
Strand 4	A	219	227	anti-parallel
Strand 5	A	18	26	anti-parallel
Strand 6	A	238	247	anti-parallel
Strand 7	A	379	386	anti-parallel
Strand 8	A	368	375	anti-parallel
Strand 9	A	300	303	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	33	first strand
Strand 2	A	68	70	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	138	first strand
Strand 2	D	255	260	anti-parallel
Strand 3	D	263	264	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	138	first strand
Strand 2	D	255	260	anti-parallel
Strand 3	D	267	268	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	264	first strand
Strand 2	A	255	260	anti-parallel
Strand 3	A	267	268	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	264	first strand
Strand 2	A	255	260	anti-parallel
Strand 3	D	137	138	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	156	161	first strand
Strand 2	B	127	132	parallel
Strand 3	B	187	193	parallel
Strand 4	B	219	227	anti-parallel
Strand 5	B	18	26	anti-parallel
Strand 6	B	238	247	anti-parallel
Strand 7	B	379	387	anti-parallel
Strand 8	B	368	375	anti-parallel
Strand 9	B	300	303	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	31	33	first strand
Strand 2	B	68	70	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	138	first strand
Strand 2	C	255	260	anti-parallel
Strand 3	C	263	264	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	138	first strand
Strand 2	C	255	260	anti-parallel
Strand 3	C	267	268	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	264	first strand
Strand 2	B	255	260	anti-parallel
Strand 3	B	267	268	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	264	first strand
Strand 2	B	255	260	anti-parallel
Strand 3	C	137	138	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	161	first strand
Strand 2	C	127	132	parallel
Strand 3	C	187	193	parallel
Strand 4	C	219	227	anti-parallel
Strand 5	C	18	26	anti-parallel
Strand 6	C	238	247	anti-parallel
Strand 7	C	379	387	anti-parallel
Strand 8	C	368	375	anti-parallel
Strand 9	C	300	303	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	33	first strand
Strand 2	C	68	70	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	156	161	first strand
Strand 2	D	127	132	parallel
Strand 3	D	187	193	parallel
Strand 4	D	219	226	anti-parallel
Strand 5	D	19	26	anti-parallel
Strand 6	D	238	247	anti-parallel
Strand 7	D	379	387	anti-parallel
Strand 8	D	368	375	anti-parallel
Strand 9	D	300	303	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	33	first strand
Strand 2	D	68	70	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F0E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F0E