Analysis of interatomic Contacts of Structural Units in PDB entry:
7F0R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F0R entry

There are 6 chains in PDB entry 7F0R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 8	PHE 230
B	ASN 6	ASP 232
C	TYR 3	THR 1356
D	GLU 16	GLY 1376
E	ALA 2	ASP 68
G	VAL 57	LYS 80

There are106 helices in PDB entry 7F0R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	48	Right-handed alpha
Helix 2	AA2	A	77	87	Right-handed alpha
Helix 3	AA3	A	113	115	Right-handed 310
Helix 4	AA4	A	211	228	Right-handed alpha
Helix 5	AA5	B	35	49	Right-handed alpha
Helix 6	AA6	B	77	87	Right-handed alpha
Helix 7	AA7	B	111	115	Right-handed 310
Helix 8	AA8	B	211	228	Right-handed alpha
Helix 9	AA9	C	4	10	Right-handed alpha
Helix 10	AB1	C	28	40	Right-handed alpha
Helix 11	AB2	C	52	59	Right-handed alpha
Helix 12	AB3	C	85	90	Right-handed alpha
Helix 13	AB4	C	210	218	Right-handed alpha
Helix 14	AB5	C	220	230	Right-handed alpha
Helix 15	AB6	C	275	286	Right-handed alpha
Helix 16	AB7	C	323	333	Right-handed alpha
Helix 17	AB8	C	350	357	Right-handed alpha
Helix 18	AB9	C	358	361	Right-handed 310
Helix 19	AC1	C	363	376	Right-handed alpha
Helix 20	AC2	C	382	394	Right-handed alpha
Helix 21	AC3	C	403	415	Right-handed alpha
Helix 22	AC4	C	426	443	Right-handed alpha
Helix 23	AC5	C	460	484	Right-handed alpha
Helix 24	AC6	C	493	498	Right-handed alpha
Helix 25	AC7	C	500	513	Right-handed alpha
Helix 26	AC8	C	524	531	Right-handed alpha
Helix 27	AC9	C	661	665	Right-handed 310
Helix 28	AD1	C	680	693	Right-handed alpha
Helix 29	AD2	C	709	716	Right-handed alpha
Helix 30	AD3	C	825	830	Right-handed alpha
Helix 31	AD4	C	863	868	Right-handed alpha
Helix 32	AD5	C	901	912	Right-handed alpha
Helix 33	AD6	C	947	985	Right-handed alpha
Helix 34	AD7	C	1021	1054	Right-handed alpha
Helix 35	AD8	C	1126	1151	Right-handed alpha
Helix 36	AD9	C	1154	1166	Right-handed alpha
Helix 37	AE1	C	1182	1192	Right-handed alpha
Helix 38	AE2	C	1206	1216	Right-handed alpha
Helix 39	AE3	C	1286	1294	Right-handed alpha
Helix 40	AE4	C	1299	1308	Right-handed alpha
Helix 41	AE5	C	1314	1326	Right-handed alpha
Helix 42	AE6	C	1336	1347	Right-handed alpha
Helix 43	AE7	D	26	34	Right-handed alpha
Helix 44	AE8	D	96	100	Right-handed 310
Helix 45	AE9	D	113	117	Right-handed 310
Helix 46	AF1	D	122	128	Right-handed alpha
Helix 47	AF2	D	131	138	Right-handed alpha
Helix 48	AF3	D	161	173	Right-handed alpha
Helix 49	AF4	D	182	191	Right-handed alpha
Helix 50	AF5	D	193	205	Right-handed alpha
Helix 51	AF6	D	211	231	Right-handed alpha
Helix 52	AF7	D	233	237	Right-handed 310
Helix 53	AF8	D	263	283	Right-handed alpha
Helix 54	AF9	D	288	308	Right-handed alpha
Helix 55	AG1	D	327	332	Right-handed alpha
Helix 56	AG2	D	339	344	Right-handed alpha
Helix 57	AG3	D	369	377	Right-handed alpha
Helix 58	AG4	D	377	388	Right-handed alpha
Helix 59	AG5	D	394	403	Right-handed alpha
Helix 60	AG6	D	406	413	Right-handed alpha
Helix 61	AG7	D	414	416	Right-handed 310
Helix 62	AG8	D	430	432	Right-handed 310
Helix 63	AG9	D	450	452	Right-handed 310
Helix 64	AH1	D	453	458	Right-handed alpha
Helix 65	AH2	D	473	484	Right-handed alpha
Helix 66	AH3	D	503	514	Right-handed alpha
Helix 67	AH4	D	529	538	Right-handed alpha
Helix 68	AH5	D	573	583	Right-handed alpha
Helix 69	AH6	D	597	613	Right-handed alpha
Helix 70	AH7	D	614	634	Right-handed alpha
Helix 71	AH8	D	648	670	Right-handed alpha
Helix 72	AH9	D	674	703	Right-handed alpha
Helix 73	AI1	D	720	729	Right-handed alpha
Helix 74	AI2	D	736	741	Right-handed alpha
Helix 75	AI3	D	768	804	Right-handed alpha
Helix 76	AI4	D	867	875	Right-handed alpha
Helix 77	AI5	D	884	888	Right-handed 310
Helix 78	AI6	D	914	925	Right-handed alpha
Helix 79	AI7	D	926	929	Right-handed 310
Helix 80	AI8	D	1051	1055	Right-handed 310
Helix 81	AI9	D	1137	1147	Right-handed alpha
Helix 82	AJ1	D	1216	1221	Right-handed alpha
Helix 83	AJ2	D	1226	1243	Right-handed alpha
Helix 84	AJ3	D	1250	1262	Right-handed alpha
Helix 85	AJ4	D	1280	1291	Right-handed alpha
Helix 86	AJ5	D	1327	1339	Right-handed alpha
Helix 87	AJ6	D	1347	1352	Right-handed alpha
Helix 88	AJ7	D	1362	1373	Right-handed alpha
Helix 89	AJ8	E	6	11	Right-handed alpha
Helix 90	AJ9	E	17	32	Right-handed alpha
Helix 91	AK1	E	45	56	Right-handed alpha
Helix 92	AK2	E	60	68	Right-handed alpha
Helix 93	AK3	G	58	77	Right-handed alpha
Helix 94	AK4	F	62	70	Right-handed alpha
Helix 95	AK5	F	71	73	Right-handed 310
Helix 96	AK6	F	77	91	Right-handed alpha
Helix 97	AK7	F	94	102	Right-handed alpha
Helix 98	AK8	F	104	112	Right-handed alpha
Helix 99	AK9	F	120	138	Right-handed alpha
Helix 100	AL1	F	147	166	Right-handed alpha
Helix 101	AL2	F	173	195	Right-handed alpha
Helix 102	AL3	F	199	207	Right-handed alpha
Helix 103	AL4	F	210	219	Right-handed alpha
Helix 104	AL5	F	250	270	Right-handed alpha
Helix 105	AL6	F	272	284	Right-handed alpha
Helix 106	AL7	F	303	325	Right-handed alpha

There are 42 sheets in PDB entry 7F0R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	18	first strand
Strand 2	A	23	27	anti-parallel
Strand 3	A	200	205	anti-parallel
Strand 4	A	184	186	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	61	first strand
Strand 2	A	139	148	anti-parallel
Strand 3	A	98	104	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	121	123	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	111	first strand
Strand 2	A	129	132	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	18	first strand
Strand 2	B	23	28	anti-parallel
Strand 3	B	198	206	anti-parallel
Strand 4	B	179	188	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	58	first strand
Strand 2	B	140	148	anti-parallel
Strand 3	B	97	103	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	121	123	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1197	1198	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	79	first strand
Strand 2	C	100	108	anti-parallel
Strand 3	C	119	127	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	142	first strand
Strand 2	C	145	147	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	456	458	first strand
Strand 2	C	151	155	anti-parallel
Strand 3	C	534	536	parallel
Strand 4	C	578	580	anti-parallel
Strand 5	C	563	564	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	160	first strand
Strand 2	C	178	181	anti-parallel
Strand 3	C	188	193	anti-parallel
Strand 4	C	197	201	anti-parallel
Strand 5	C	208	209	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	290	first strand
Strand 2	C	242	244	anti-parallel
Strand 3	C	233	235	anti-parallel
Strand 4	C	337	341	anti-parallel
Strand 5	C	301	302	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	254	255	first strand
Strand 2	C	272	273	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	306	307	first strand
Strand 2	C	314	316	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	585	586	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	604	611	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	585	586	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	657	659	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	639	642	first strand
Strand 2	C	647	650	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	755	757	first strand
Strand 2	C	736	739	anti-parallel
Strand 3	C	727	732	anti-parallel
Strand 4	C	781	782	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	762	763	first strand
Strand 2	C	769	770	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	773	774	first strand
Strand 2	C	789	790	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	794	795	first strand
Strand 2	C	798	799	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1113	1115	first strand
Strand 2	C	804	809	parallel
Strand 3	C	1244	1246	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	837	846	first strand
Strand 2	C	1063	1073	anti-parallel
Strand 3	C	932	940	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	892	894	first strand
Strand 2	C	918	920	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1083	1084	first strand
Strand 2	C	1248	1249	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1104	1105	first strand
Strand 2	C	1227	1228	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1350	1351	first strand
Strand 2	D	23	24	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	104	111	first strand
Strand 2	D	239	243	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	145	147	first strand
Strand 2	D	177	179	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	253	254	first strand
Strand 2	D	260	261	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	350	353	first strand
Strand 2	D	466	469	anti-parallel
Strand 3	D	421	425	anti-parallel
Strand 4	D	434	437	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	355	357	first strand
Strand 2	D	447	449	parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	527	first strand
Strand 2	D	549	556	parallel
Strand 3	D	564	570	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	820	822	first strand
Strand 2	D	880	882	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	950	951	first strand
Strand 2	D	1016	1019	anti-parallel
Strand 3	D	1001	1003	anti-parallel
Strand 4	D	973	975	anti-parallel
Strand 5	D	965	967	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	957	961	first strand
Strand 2	D	981	985	anti-parallel
Strand 3	D	991	996	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1024	1026	first strand
Strand 2	D	1123	1125	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1099	1100	first strand
Strand 2	D	1077	1081	anti-parallel
Strand 3	D	1033	1038	anti-parallel
Strand 4	D	1114	1115	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1046	1047	first strand
Strand 2	D	1059	1061	anti-parallel
Strand 3	D	1106	1107	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1162	1165	first strand
Strand 2	D	1173	1178	anti-parallel
Strand 3	D	1188	1190	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1277	1279	first strand
Strand 2	D	1263	1266	anti-parallel
Strand 3	D	1302	1303	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F0R

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F0R