Analysis of interatomic Contacts of Structural Units in PDB entry:
7F0U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F0U entry

There are 4 chains in PDB entry 7F0U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 15GLU 237
B
 GLU 15GLU 237
C
 MET 1GLY 76
D
 MET 1GLY 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7F0U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 19Right-handed 310
Helix 2
AA2
A
21 25Right-handed 310
Helix 3
AA3
A
43 57Right-handed alpha
Helix 4
AA4
A
62 74Right-handed alpha
Helix 5
AA5
A
77 89Right-handed alpha
Helix 6
AA6
A
97 106Right-handed alpha
Helix 7
AA7
A
107 109Right-handed 310
Helix 8
AA8
A
180 184Right-handed 310
Helix 9
AA9
A
224 228Right-handed 310
Helix 10
AB1
B
15 19Right-handed 310
Helix 11
AB2
B
21 25Right-handed 310
Helix 12
AB3
B
43 56Right-handed alpha
Helix 13
AB4
B
62 75Right-handed alpha
Helix 14
AB5
B
77 89Right-handed alpha
Helix 15
AB6
B
97 106Right-handed alpha
Helix 16
AB7
B
107 109Right-handed 310
Helix 17
AB8
B
180 184Right-handed 310
Helix 18
AB9
B
224 228Right-handed 310
Helix 19
AC1
C
22 35Right-handed alpha
Helix 20
AC2
C
37 39Right-handed 310
Helix 21
AC3
C
56 60Right-handed 310
Helix 22
AC4
D
22 35Right-handed alpha
Helix 23
AC5
D
37 39Right-handed 310
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There are 8 sheets in PDB entry 7F0U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 31first strand
Strand 2
A
34 37anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 132first strand
Strand 2
A
113 120anti-parallel
Strand 3
A
156 171anti-parallel
Strand 4
A
146 150anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
156 171parallel
Strand 3
A
230 236anti-parallel
Strand 4
A
189 194anti-parallel
Strand 5
A
203 208anti-parallel
Strand 6
A
213 216anti-parallel
Strand 7
A
219 222anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
34 37anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 132first strand
Strand 2
B
113 121anti-parallel
Strand 3
B
156 171anti-parallel
Strand 4
B
146 150anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
156 171parallel
Strand 3
B
230 236anti-parallel
Strand 4
B
189 194anti-parallel
Strand 5
B
203 208anti-parallel
Strand 6
B
213 216anti-parallel
Strand 7
B
219 222anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 6anti-parallel
Strand 3
C
66 71parallel
Strand 4
C
41 45anti-parallel
Strand 5
C
48 49anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 6anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 49anti-parallel
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