Analysis of interatomic Contacts of Structural Units in PDB entry:
7F1N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F1N entry

There are 2 chains in PDB entry 7F1N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 509
B
 PRO 2PHE 511
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7F1N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 19Right-handed alpha
Helix 2
AA2
A
32 40Right-handed alpha
Helix 3
AA3
A
40 46Right-handed alpha
Helix 4
AA4
A
53 57Right-handed 310
Helix 5
AA5
A
59 74Right-handed alpha
Helix 6
AA6
A
84 89Right-handed alpha
Helix 7
AA7
A
114 125Right-handed alpha
Helix 8
AA8
A
126 143Right-handed alpha
Helix 9
AA9
A
162 170Right-handed alpha
Helix 10
AB1
A
176 180Right-handed 310
Helix 11
AB2
A
181 199Right-handed alpha
Helix 12
AB3
A
210 220Right-handed alpha
Helix 13
AB4
A
221 225Right-handed 310
Helix 14
AB5
A
232 258Right-handed alpha
Helix 15
AB6
A
287 302Right-handed alpha
Helix 16
AB7
A
303 310Right-handed alpha
Helix 17
AB8
A
327 330Right-handed 310
Helix 18
AB9
A
393 405Right-handed alpha
Helix 19
AC1
A
424 444Right-handed alpha
Helix 20
AC2
A
459 466Right-handed 310
Helix 21
AC3
A
483 496Right-handed alpha
Helix 22
AC4
A
499 506Right-handed alpha
Helix 23
AC5
B
14 19Right-handed alpha
Helix 24
AC6
B
32 39Right-handed alpha
Helix 25
AC7
B
40 46Right-handed alpha
Helix 26
AC8
B
53 57Right-handed 310
Helix 27
AC9
B
59 74Right-handed alpha
Helix 28
AD1
B
84 89Right-handed alpha
Helix 29
AD2
B
114 125Right-handed alpha
Helix 30
AD3
B
126 143Right-handed alpha
Helix 31
AD4
B
162 170Right-handed alpha
Helix 32
AD5
B
176 180Right-handed 310
Helix 33
AD6
B
181 199Right-handed alpha
Helix 34
AD7
B
210 220Right-handed alpha
Helix 35
AD8
B
221 225Right-handed 310
Helix 36
AD9
B
232 258Right-handed alpha
Helix 37
AE1
B
287 302Right-handed alpha
Helix 38
AE2
B
303 310Right-handed alpha
Helix 39
AE3
B
393 405Right-handed alpha
Helix 40
AE4
B
424 444Right-handed alpha
Helix 41
AE5
B
459 466Right-handed 310
Helix 42
AE6
B
483 496Right-handed alpha
Helix 43
AE7
B
499 506Right-handed alpha
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There are 11 sheets in PDB entry 7F1N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
78 82parallel
Strand 3
A
146 152parallel
Strand 4
A
204 209parallel
Strand 5
A
271 277parallel
Strand 6
A
335 339parallel
Strand 7
A
410 414parallel
Strand 8
A
446 451parallel
Strand 9
A
8 12parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 102first strand
Strand 2
A
108 112anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 283first strand
Strand 2
A
344 346parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 314first strand
Strand 2
A
324 325anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 349first strand
Strand 2
A
361 362anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 474first strand
Strand 2
A
479 482anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 12first strand
Strand 2
B
78 82parallel
Strand 3
B
146 152parallel
Strand 4
B
204 209parallel
Strand 5
B
271 277parallel
Strand 6
B
335 339parallel
Strand 7
B
410 414parallel
Strand 8
B
446 451parallel
Strand 9
B
8 12parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 102first strand
Strand 2
B
108 112anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
281 283first strand
Strand 2
B
344 349parallel
Strand 3
B
361 364anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
311 314first strand
Strand 2
B
324 330anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
471 474first strand
Strand 2
B
479 482anti-parallel
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