Analysis of interatomic Contacts of Structural Units in PDB entry:
7F2E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F2E entry

There are 12 chains in PDB entry 7F2E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LYS 257	THR 362
A	LYS 257	THR 362
C	LYS 256	THR 362
D	LYS 256	THR 362
E	LYS 266	THR 362
F	LYS 257	THR 362
G	LYS 256	THR 362
H	LYS 257	THR 362
I	LYS 256	THR 362
J	LYS 257	THR 362
K	LYS 266	THR 362
L	PRO 258	THR 362

There are 88 helices in PDB entry 7F2E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	258	262	Right-handed 310
Helix 2	AA2	B	269	275	Right-handed alpha
Helix 3	AA3	B	288	295	Right-handed alpha
Helix 4	AA4	B	296	298	Right-handed 310
Helix 5	AA5	B	300	306	Right-handed alpha
Helix 6	AA6	B	310	318	Right-handed alpha
Helix 7	AA7	B	345	357	Right-handed alpha
Helix 8	AA8	B	358	362	Right-handed 310
Helix 9	AA9	A	258	262	Right-handed 310
Helix 10	AB1	A	269	275	Right-handed alpha
Helix 11	AB2	A	288	295	Right-handed alpha
Helix 12	AB3	A	296	298	Right-handed 310
Helix 13	AB4	A	300	306	Right-handed alpha
Helix 14	AB5	A	310	318	Right-handed alpha
Helix 15	AB6	A	345	355	Right-handed alpha
Helix 16	AB7	C	258	262	Right-handed 310
Helix 17	AB8	C	269	275	Right-handed alpha
Helix 18	AB9	C	288	295	Right-handed alpha
Helix 19	AC1	C	296	298	Right-handed 310
Helix 20	AC2	C	300	306	Right-handed alpha
Helix 21	AC3	C	310	312	Right-handed 310
Helix 22	AC4	C	313	318	Right-handed alpha
Helix 23	AC5	C	345	355	Right-handed alpha
Helix 24	AC6	D	258	262	Right-handed 310
Helix 25	AC7	D	269	275	Right-handed alpha
Helix 26	AC8	D	288	295	Right-handed alpha
Helix 27	AC9	D	296	298	Right-handed 310
Helix 28	AD1	D	300	306	Right-handed alpha
Helix 29	AD2	D	310	318	Right-handed alpha
Helix 30	AD3	D	345	355	Right-handed alpha
Helix 31	AD4	D	358	362	Right-handed 310
Helix 32	AD5	E	288	295	Right-handed alpha
Helix 33	AD6	E	296	298	Right-handed 310
Helix 34	AD7	E	300	305	Right-handed alpha
Helix 35	AD8	E	306	308	Right-handed 310
Helix 36	AD9	E	312	318	Right-handed alpha
Helix 37	AE1	E	348	355	Right-handed alpha
Helix 38	AE2	F	258	262	Right-handed 310
Helix 39	AE3	F	269	274	Right-handed alpha
Helix 40	AE4	F	288	294	Right-handed alpha
Helix 41	AE5	F	300	306	Right-handed alpha
Helix 42	AE6	F	310	318	Right-handed alpha
Helix 43	AE7	F	350	355	Right-handed alpha
Helix 44	AE8	F	358	362	Right-handed 310
Helix 45	AE9	G	258	262	Right-handed 310
Helix 46	AF1	G	269	275	Right-handed alpha
Helix 47	AF2	G	288	295	Right-handed alpha
Helix 48	AF3	G	296	298	Right-handed 310
Helix 49	AF4	G	300	306	Right-handed alpha
Helix 50	AF5	G	310	318	Right-handed alpha
Helix 51	AF6	G	345	355	Right-handed alpha
Helix 52	AF7	G	358	362	Right-handed 310
Helix 53	AF8	H	258	262	Right-handed 310
Helix 54	AF9	H	269	274	Right-handed alpha
Helix 55	AG1	H	288	295	Right-handed alpha
Helix 56	AG2	H	296	298	Right-handed 310
Helix 57	AG3	H	301	306	Right-handed alpha
Helix 58	AG4	H	310	318	Right-handed alpha
Helix 59	AG5	H	345	355	Right-handed alpha
Helix 60	AG6	H	358	362	Right-handed 310
Helix 61	AG7	I	258	262	Right-handed 310
Helix 62	AG8	I	269	275	Right-handed alpha
Helix 63	AG9	I	288	295	Right-handed alpha
Helix 64	AH1	I	296	298	Right-handed 310
Helix 65	AH2	I	301	306	Right-handed alpha
Helix 66	AH3	I	310	318	Right-handed alpha
Helix 67	AH4	I	345	357	Right-handed alpha
Helix 68	AH5	I	358	362	Right-handed 310
Helix 69	AH6	J	258	262	Right-handed 310
Helix 70	AH7	J	269	275	Right-handed alpha
Helix 71	AH8	J	288	295	Right-handed alpha
Helix 72	AH9	J	296	298	Right-handed 310
Helix 73	AI1	J	300	306	Right-handed alpha
Helix 74	AI2	J	310	318	Right-handed alpha
Helix 75	AI3	J	345	355	Right-handed alpha
Helix 76	AI4	J	358	362	Right-handed 310
Helix 77	AI5	K	288	295	Right-handed alpha
Helix 78	AI6	K	296	298	Right-handed 310
Helix 79	AI7	K	300	305	Right-handed alpha
Helix 80	AI8	K	306	308	Right-handed 310
Helix 81	AI9	K	312	318	Right-handed alpha
Helix 82	AJ1	K	345	353	Right-handed alpha
Helix 83	AJ2	L	258	262	Right-handed 310
Helix 84	AJ3	L	269	274	Right-handed alpha
Helix 85	AJ4	L	288	293	Right-handed alpha
Helix 86	AJ5	L	304	308	Right-handed 310
Helix 87	AJ6	L	310	318	Right-handed alpha
Helix 88	AJ7	L	349	355	Right-handed alpha

There are 9 sheets in PDB entry 7F2E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	320	first strand
Strand 2	B	329	339	anti-parallel
Strand 3	B	323	324	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	320	first strand
Strand 2	B	329	339	anti-parallel
Strand 3	A	329	338	anti-parallel
Strand 4	A	321	324	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	321	325	first strand
Strand 2	C	328	338	anti-parallel
Strand 3	D	329	339	anti-parallel
Strand 4	D	319	324	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	323	325	first strand
Strand 2	E	328	330	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	333	338	first strand
Strand 2	F	329	335	anti-parallel
Strand 3	F	323	324	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	319	325	first strand
Strand 2	G	328	338	anti-parallel
Strand 3	H	328	338	anti-parallel
Strand 4	H	319	325	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	321	325	first strand
Strand 2	I	328	338	anti-parallel
Strand 3	J	328	338	anti-parallel
Strand 4	J	321	325	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	323	325	first strand
Strand 2	K	328	330	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	333	339	first strand
Strand 2	L	328	335	anti-parallel
Strand 3	L	323	325	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F2E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F2E