Analysis of interatomic Contacts of Structural Units in PDB entry:
7F2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F2H entry

There are 2 chains in PDB entry 7F2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 20GLU 236
B
 PRO 21VAL 235
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7F2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 32Right-handed alpha
Helix 2
AA2
A
33 34Right-handed 310
Helix 3
AA3
A
35 39Right-handed 310
Helix 4
AA4
A
45 52Right-handed alpha
Helix 5
AA5
A
53 57Right-handed 310
Helix 6
AA6
A
58 63Right-handed 310
Helix 7
AA7
A
70 84Right-handed alpha
Helix 8
AA8
A
94 107Right-handed alpha
Helix 9
AA9
A
111 118Right-handed alpha
Helix 10
AB1
A
127 136Right-handed alpha
Helix 11
AB2
A
139 144Right-handed alpha
Helix 12
AB3
A
145 147Right-handed 310
Helix 13
AB4
A
148 152Right-handed 310
Helix 14
AB5
A
158 167Right-handed alpha
Helix 15
AB6
A
168 177Right-handed alpha
Helix 16
AB7
A
201 212Right-handed alpha
Helix 17
AB8
B
22 33Right-handed alpha
Helix 18
AB9
B
35 39Right-handed 310
Helix 19
AC1
B
45 52Right-handed alpha
Helix 20
AC2
B
53 57Right-handed 310
Helix 21
AC3
B
58 63Right-handed 310
Helix 22
AC4
B
70 75Right-handed alpha
Helix 23
AC5
B
94 99Right-handed alpha
Helix 24
AC6
B
99 104Right-handed alpha
Helix 25
AC7
B
111 117Right-handed alpha
Helix 26
AC8
B
127 136Right-handed alpha
Helix 27
AC9
B
139 144Right-handed alpha
Helix 28
AD1
B
145 147Right-handed 310
Helix 29
AD2
B
148 152Right-handed 310
Helix 30
AD3
B
158 167Right-handed alpha
Helix 31
AD4
B
168 177Right-handed alpha
Helix 32
AD5
B
200 212Right-handed alpha
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There are 4 sheets in PDB entry 7F2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
195 200anti-parallel
Strand 3
A
187 192anti-parallel
Strand 4
A
181 184anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 217first strand
Strand 2
A
231 235anti-parallel
Strand 3
A
227 228anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 44first strand
Strand 2
B
195 199anti-parallel
Strand 3
B
187 192anti-parallel
Strand 4
B
181 184anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 217first strand
Strand 2
B
231 234anti-parallel
Strand 3
B
227 228anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il