Analysis of interatomic Contacts of Structural Units in PDB entry:
7F2Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F2Y entry

There is 1 chain in PDB entry 7F2Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7F2Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 40Right-handed 310
Helix 2
AA2
A
41 52Right-handed alpha
Helix 3
AA3
A
69 71Right-handed 310
Helix 4
AA4
A
83 92Right-handed alpha
Helix 5
AA5
A
93 98Right-handed alpha
Helix 6
AA6
A
99 103Right-handed 310
Helix 7
AA7
A
136 141Right-handed 310
Helix 8
AA8
A
154 160Right-handed alpha
Helix 9
AA9
A
161 165Right-handed 310
Helix 10
AB1
A
210 221Right-handed alpha
Helix 11
AB2
A
221 235Right-handed alpha
Helix 12
AB3
A
235 240Right-handed alpha
Helix 13
AB4
A
268 279Right-handed alpha
Helix 14
AB5
A
279 295Right-handed alpha
Helix 15
AB6
A
312 314Right-handed 310
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There are 2 sheets in PDB entry 7F2Y. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
144 146anti-parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
303 311anti-parallel
Strand 3
A
197 205anti-parallel
Strand 4
A
256 266anti-parallel
Strand 5
A
241 250anti-parallel
Strand 6
A
60 67anti-parallel
Strand 7
A
73 81anti-parallel
Strand 8
A
25 35anti-parallel
Strand 9
A
112 121anti-parallel
Strand 10
A
316 321anti-parallel
Strand 11
A
188 192anti-parallel
Strand 12
A
334 337anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il