Analysis of interatomic Contacts of Structural Units in PDB entry:
7F35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F35 entry

There are 6 chains in PDB entry 7F35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP -1ARG 213
B
 GLU 1ARG 216
C
 ASP -1ARG 213
D
 GLU 1PRO 215
E
 ASP -1ARG 213
F
 GLU 1PRO 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7F35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
81 85Right-handed 310
Helix 2
AA2
A
123 130Right-handed alpha
Helix 3
AA3
A
185 191Right-handed alpha
Helix 4
AA4
B
28 32Right-handed 310
Helix 5
AA5
B
62 65Right-handed 310
Helix 6
AA6
B
87 91Right-handed 310
Helix 7
AA7
B
159 161Right-handed 310
Helix 8
AA8
C
81 85Right-handed 310
Helix 9
AA9
C
123 130Right-handed alpha
Helix 10
AB1
C
185 189Right-handed alpha
Helix 11
AB2
D
28 32Right-handed 310
Helix 12
AB3
D
62 65Right-handed 310
Helix 13
AB4
D
87 91Right-handed 310
Helix 14
AB5
D
203 206Right-handed 310
Helix 15
AB6
E
81 85Right-handed 310
Helix 16
AB7
E
123 130Right-handed alpha
Helix 17
AB8
E
185 189Right-handed alpha
Helix 18
AB9
F
28 32Right-handed 310
Helix 19
AC1
F
62 65Right-handed 310
Helix 20
AC2
F
87 91Right-handed 310
Helix 21
AC3
F
203 206Right-handed 310
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There are 33 sheets in PDB entry 7F35. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
17 27anti-parallel
Strand 3
A
70 77anti-parallel
Strand 4
A
64 67anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
104 109parallel
Strand 3
A
86 93anti-parallel
Strand 4
A
34 40anti-parallel
Strand 5
A
47 48anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
104 109parallel
Strand 3
A
86 93anti-parallel
Strand 4
A
98 100anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 120first strand
Strand 2
A
131 141anti-parallel
Strand 3
A
175 184anti-parallel
Strand 4
A
161 165anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
148 152anti-parallel
Strand 3
A
193 198anti-parallel
Strand 4
A
207 212anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 6first strand
Strand 2
B
18 26anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
68 73anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
110 114parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
33 39anti-parallel
Strand 5
B
46 51anti-parallel
Strand 6
B
58 60anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
110 114parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
104 106anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 127first strand
Strand 2
B
138 148anti-parallel
Strand 3
B
177 187anti-parallel
Strand 4
B
166 168anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 127first strand
Strand 2
B
138 148anti-parallel
Strand 3
B
177 187anti-parallel
Strand 4
B
172 174anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 157first strand
Strand 2
B
197 202anti-parallel
Strand 3
B
207 212anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 5first strand
Strand 2
C
17 27anti-parallel
Strand 3
C
64 77anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 12first strand
Strand 2
C
104 109parallel
Strand 3
C
86 93anti-parallel
Strand 4
C
34 40anti-parallel
Strand 5
C
47 48anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 12first strand
Strand 2
C
104 109parallel
Strand 3
C
86 93anti-parallel
Strand 4
C
98 100anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 120first strand
Strand 2
C
131 141anti-parallel
Strand 3
C
175 184anti-parallel
Strand 4
C
161 165anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 157first strand
Strand 2
C
147 152anti-parallel
Strand 3
C
193 199anti-parallel
Strand 4
C
207 212anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 6first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
110 114parallel
Strand 3
D
92 99anti-parallel
Strand 4
D
33 39anti-parallel
Strand 5
D
46 51anti-parallel
Strand 6
D
58 60anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
110 114parallel
Strand 3
D
92 99anti-parallel
Strand 4
D
104 106anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
123 127first strand
Strand 2
D
138 148anti-parallel
Strand 3
D
177 187anti-parallel
Strand 4
D
166 168anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
123 127first strand
Strand 2
D
138 148anti-parallel
Strand 3
D
177 187anti-parallel
Strand 4
D
172 174anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
154 157first strand
Strand 2
D
197 202anti-parallel
Strand 3
D
207 212anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 5first strand
Strand 2
E
17 23anti-parallel
Strand 3
E
72 77anti-parallel
Strand 4
E
64 66anti-parallel
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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
8 12first strand
Strand 2
E
104 109parallel
Strand 3
E
87 93anti-parallel
Strand 4
E
34 40anti-parallel
Strand 5
E
47 48anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
8 12first strand
Strand 2
E
104 109parallel
Strand 3
E
87 93anti-parallel
Strand 4
E
98 100anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 120first strand
Strand 2
E
131 141anti-parallel
Strand 3
E
175 184anti-parallel
Strand 4
E
161 165anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
194 195first strand
Strand 2
E
210 211anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 6first strand
Strand 2
F
18 25anti-parallel
Strand 3
F
78 83anti-parallel
Strand 4
F
68 73anti-parallel
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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 12first strand
Strand 2
F
110 114parallel
Strand 3
F
92 99anti-parallel
Strand 4
F
33 39anti-parallel
Strand 5
F
45 51anti-parallel
Strand 6
F
58 60anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 12first strand
Strand 2
F
110 114parallel
Strand 3
F
92 99anti-parallel
Strand 4
F
104 106anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
123 127first strand
Strand 2
F
138 148anti-parallel
Strand 3
F
177 187anti-parallel
Strand 4
F
166 168anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
123 127first strand
Strand 2
F
138 148anti-parallel
Strand 3
F
177 187anti-parallel
Strand 4
F
172 174anti-parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
154 157first strand
Strand 2
F
197 202anti-parallel
Strand 3
F
207 212anti-parallel
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