Analysis of interatomic Contacts of Structural Units in PDB entry:
7F3A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F3A entry

There is 1 chain in PDB entry 7F3A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0GLY 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7F3A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 12Right-handed alpha
Helix 2
AA2
A
17 21Right-handed 310
Helix 3
AA3
A
32 37Right-handed alpha
Helix 4
AA4
A
48 55Right-handed alpha
Helix 5
AA5
A
71 87Right-handed alpha
Helix 6
AA6
A
96 101Right-handed alpha
Helix 7
AA7
A
110 127Right-handed alpha
Helix 8
AA8
A
141 149Right-handed alpha
Helix 9
AA9
A
150 154Right-handed 310
Helix 10
AB1
A
155 172Right-handed alpha
Helix 11
AB2
A
183 193Right-handed alpha
Helix 12
AB3
A
207 231Right-handed alpha
Helix 13
AB4
A
231 236Right-handed alpha
Helix 14
AB5
A
254 269Right-handed alpha
Helix 15
AB6
A
269 279Right-handed alpha
Helix 16
AB7
A
282 290Right-handed alpha
Helix 17
AB8
A
291 293Right-handed 310
Helix 18
AB9
A
297 307Right-handed alpha
Helix 19
AC1
A
333 337Right-handed alpha
Helix 20
AC2
A
365 379Right-handed alpha
Helix 21
AC3
A
400 406Right-handed alpha
Helix 22
AC4
A
407 428Right-handed alpha
Helix 23
AC5
A
444 449Right-handed 310
Helix 24
AC6
A
469 481Right-handed alpha
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There are 5 sheets in PDB entry 7F3A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
90 94parallel
Strand 3
A
130 136parallel
Strand 4
A
177 182parallel
Strand 5
A
238 244parallel
Strand 6
A
311 315parallel
Strand 7
A
384 388parallel
Strand 8
A
431 437parallel
Strand 9
A
26 30parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 250first strand
Strand 2
A
319 324parallel
Strand 3
A
340 343anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 355first strand
Strand 2
A
362 363anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 394first strand
Strand 2
A
451 452anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 459first strand
Strand 2
A
465 468anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il