Analysis of interatomic Contacts of Structural Units in PDB entry:
7F3N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F3N entry

There is 1 chain in PDB entry 7F3N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 146LEU 484
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7F3N. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
146 177Right-handed alpha
Helix 2
AA2
A
182 209Right-handed alpha
Helix 3
AA3
A
220 224Right-handed 310
Helix 4
AA4
A
239 246Right-handed alpha
Helix 5
AA5
A
320 335Right-handed alpha
Helix 6
AA6
A
335 348Right-handed alpha
Helix 7
AA7
A
353 371Right-handed alpha
Helix 8
AA8
A
450 468Right-handed alpha
Helix 9
AA9
A
469 483Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7F3N.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
237 238first strand
Strand 2
A
214 218parallel
Strand 3
A
249 256parallel
Strand 4
A
261 268anti-parallel
Strand 5
A
273 280anti-parallel
Strand 6
A
306 312parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il