Analysis of interatomic Contacts of Structural Units in PDB entry:
7F3X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F3X entry

There are 2 chains in PDB entry 7F3X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 42LEU 490
B
LEU 42LEU 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7F3X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
42 50Right-handed alpha
Helix 2
AA2
A
52 64Right-handed alpha
Helix 3
AA3
A
64 76Right-handed alpha
Helix 4
AA4
A
81 100Right-handed alpha
Helix 5
AA5
A
103 120Right-handed alpha
Helix 6
AA6
A
124 147Right-handed alpha
Helix 7
AA7
A
155 177Right-handed alpha
Helix 8
AA8
A
184 190Right-handed alpha
Helix 9
AA9
A
197 206Right-handed alpha
Helix 10
AB1
A
219 227Right-handed alpha
Helix 11
AB2
A
240 262Right-handed alpha
Helix 12
AB3
A
279 290Right-handed alpha
Helix 13
AB4
A
294 311Right-handed alpha
Helix 14
AB5
A
344 348Right-handed 310
Helix 15
AB6
A
353 363Right-handed alpha
Helix 16
AB7
A
364 367Right-handed 310
Helix 17
AB8
A
375 388Right-handed alpha
Helix 18
AB9
A
392 415Right-handed alpha
Helix 19
AC1
A
420 427Right-handed alpha
Helix 20
AC2
A
431 455Right-handed alpha
Helix 21
AC3
A
459 467Right-handed alpha
Helix 22
AC4
A
470 490Right-handed alpha
Helix 23
AC5
B
43 50Right-handed alpha
Helix 24
AC6
B
52 64Right-handed alpha
Helix 25
AC7
B
64 75Right-handed alpha
Helix 26
AC8
B
81 100Right-handed alpha
Helix 27
AC9
B
104 120Right-handed alpha
Helix 28
AD1
B
124 147Right-handed alpha
Helix 29
AD2
B
155 175Right-handed alpha
Helix 30
AD3
B
184 191Right-handed alpha
Helix 31
AD4
B
197 206Right-handed alpha
Helix 32
AD5
B
219 227Right-handed alpha
Helix 33
AD6
B
240 262Right-handed alpha
Helix 34
AD7
B
279 290Right-handed alpha
Helix 35
AD8
B
294 311Right-handed alpha
Helix 36
AD9
B
344 348Right-handed 310
Helix 37
AE1
B
354 363Right-handed alpha
Helix 38
AE2
B
374 388Right-handed alpha
Helix 39
AE3
B
392 415Right-handed alpha
Helix 40
AE4
B
432 455Right-handed alpha
Helix 41
AE5
B
457 467Right-handed alpha
Helix 42
AE6
B
470 490Right-handed alpha
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There are 2 sheets in PDB entry 7F3X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
318 319first strand
Strand 2
A
325 326anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
318 319first strand
Strand 2
B
325 326anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il