Analysis of interatomic Contacts of Structural Units in PDB entry:
7F4R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F4R entry

There are 4 chains in PDB entry 7F4R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 182LEU 372
B
 THR 184LEU 372
C
 LEU 186LEU 372
D
 THR 184GLU 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7F4R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
187 200Right-handed alpha
Helix 2
AA2
A
231 238Right-handed alpha
Helix 3
AA3
A
239 243Right-handed 310
Helix 4
AA4
A
254 268Right-handed alpha
Helix 5
AA5
A
335 346Right-handed alpha
Helix 6
AA6
A
359 363Right-handed 310
Helix 7
AA7
B
187 200Right-handed alpha
Helix 8
AA8
B
231 237Right-handed alpha
Helix 9
AA9
B
239 244Right-handed alpha
Helix 10
AB1
B
254 256Right-handed 310
Helix 11
AB2
B
257 268Right-handed alpha
Helix 12
AB3
B
335 346Right-handed alpha
Helix 13
AB4
B
359 363Right-handed 310
Helix 14
AB5
C
188 200Right-handed alpha
Helix 15
AB6
C
231 237Right-handed alpha
Helix 16
AB7
C
239 244Right-handed 310
Helix 17
AB8
C
254 256Right-handed 310
Helix 18
AB9
C
257 268Right-handed alpha
Helix 19
AC1
C
335 346Right-handed alpha
Helix 20
AC2
C
359 363Right-handed 310
Helix 21
AC3
D
188 200Right-handed alpha
Helix 22
AC4
D
231 237Right-handed alpha
Helix 23
AC5
D
239 243Right-handed 310
Helix 24
AC6
D
254 256Right-handed 310
Helix 25
AC7
D
257 268Right-handed alpha
Helix 26
AC8
D
335 346Right-handed alpha
Helix 27
AC9
D
359 363Right-handed 310
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There are 4 sheets in PDB entry 7F4R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
271 283parallel
Strand 3
A
297 307anti-parallel
Strand 4
A
247 253anti-parallel
Strand 5
A
205 208parallel
Strand 6
A
351 354parallel
Strand 7
B
365 368parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 368first strand
Strand 2
B
351 354parallel
Strand 3
B
205 208parallel
Strand 4
B
247 253parallel
Strand 5
B
297 307anti-parallel
Strand 6
B
271 283anti-parallel
Strand 7
B
323 325parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
323 325first strand
Strand 2
C
271 283parallel
Strand 3
C
297 307anti-parallel
Strand 4
C
247 253anti-parallel
Strand 5
C
205 208parallel
Strand 6
C
351 354parallel
Strand 7
D
365 368parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
365 368first strand
Strand 2
D
351 354parallel
Strand 3
D
205 208parallel
Strand 4
D
247 253parallel
Strand 5
D
297 307anti-parallel
Strand 6
D
271 283anti-parallel
Strand 7
D
323 325parallel
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