Analysis of interatomic Contacts of Structural Units in PDB entry:
7F57

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F57 entry

There are 5 chains in PDB entry 7F57 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 33	MET 867
B	THR 33	MET 867
C	THR 33	MET 867
D	THR 33	ALA 850
E	CYS 45	LYS 376

There are121 helices in PDB entry 7F57. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	87	102	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	152	168	Right-handed alpha
Helix 5	AA5	A	179	185	Right-handed alpha
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	191	194	Right-handed 310
Helix 8	AA8	A	210	222	Right-handed alpha
Helix 9	AA9	A	231	245	Right-handed alpha
Helix 10	AB1	A	268	273	Right-handed alpha
Helix 11	AB2	A	286	302	Right-handed alpha
Helix 12	AB3	A	306	310	Right-handed 310
Helix 13	AB4	A	317	335	Right-handed alpha
Helix 14	AB5	A	355	365	Right-handed alpha
Helix 15	AB6	A	461	475	Right-handed alpha
Helix 16	AB7	A	499	507	Right-handed alpha
Helix 17	AB8	A	522	527	Right-handed alpha
Helix 18	AB9	A	560	584	Right-handed alpha
Helix 19	AC1	A	607	620	Right-handed alpha
Helix 20	AC2	A	631	664	Right-handed alpha
Helix 21	AC3	A	670	677	Right-handed alpha
Helix 22	AC4	A	690	697	Right-handed alpha
Helix 23	AC5	A	699	713	Right-handed alpha
Helix 24	AC6	A	721	731	Right-handed alpha
Helix 25	AC7	A	739	749	Right-handed alpha
Helix 26	AC8	A	773	788	Right-handed alpha
Helix 27	AC9	A	789	799	Right-handed alpha
Helix 28	AD1	A	816	821	Right-handed alpha
Helix 29	AD2	A	821	850	Right-handed alpha
Helix 30	AD3	A	855	867	Right-handed alpha
Helix 31	AD4	B	51	67	Right-handed alpha
Helix 32	AD5	B	87	102	Right-handed alpha
Helix 33	AD6	B	111	126	Right-handed alpha
Helix 34	AD7	B	152	167	Right-handed alpha
Helix 35	AD8	B	179	185	Right-handed alpha
Helix 36	AD9	B	185	190	Right-handed alpha
Helix 37	AE1	B	191	194	Right-handed 310
Helix 38	AE2	B	208	210	Right-handed 310
Helix 39	AE3	B	211	222	Right-handed alpha
Helix 40	AE4	B	231	245	Right-handed alpha
Helix 41	AE5	B	260	264	Right-handed 310
Helix 42	AE6	B	269	273	Right-handed 310
Helix 43	AE7	B	286	301	Right-handed alpha
Helix 44	AE8	B	317	335	Right-handed alpha
Helix 45	AE9	B	355	365	Right-handed alpha
Helix 46	AF1	B	415	419	Right-handed 310
Helix 47	AF2	B	461	474	Right-handed alpha
Helix 48	AF3	B	500	506	Right-handed alpha
Helix 49	AF4	B	520	527	Right-handed alpha
Helix 50	AF5	B	551	557	Right-handed alpha
Helix 51	AF6	B	560	584	Right-handed alpha
Helix 52	AF7	B	609	620	Right-handed alpha
Helix 53	AF8	B	630	662	Right-handed alpha
Helix 54	AF9	B	672	677	Right-handed alpha
Helix 55	AG1	B	688	695	Right-handed alpha
Helix 56	AG2	B	701	712	Right-handed alpha
Helix 57	AG3	B	720	731	Right-handed alpha
Helix 58	AG4	B	740	747	Right-handed alpha
Helix 59	AG5	B	773	788	Right-handed alpha
Helix 60	AG6	B	789	799	Right-handed alpha
Helix 61	AG7	B	816	821	Right-handed alpha
Helix 62	AG8	B	821	849	Right-handed alpha
Helix 63	AG9	B	854	867	Right-handed alpha
Helix 64	AH1	C	51	67	Right-handed alpha
Helix 65	AH2	C	87	102	Right-handed alpha
Helix 66	AH3	C	111	126	Right-handed alpha
Helix 67	AH4	C	152	167	Right-handed alpha
Helix 68	AH5	C	180	190	Right-handed alpha
Helix 69	AH6	C	191	194	Right-handed 310
Helix 70	AH7	C	211	221	Right-handed alpha
Helix 71	AH8	C	231	245	Right-handed alpha
Helix 72	AH9	C	286	301	Right-handed alpha
Helix 73	AI1	C	317	335	Right-handed alpha
Helix 74	AI2	C	355	365	Right-handed alpha
Helix 75	AI3	C	454	457	Right-handed 310
Helix 76	AI4	C	462	475	Right-handed alpha
Helix 77	AI5	C	499	507	Right-handed alpha
Helix 78	AI6	C	520	525	Right-handed alpha
Helix 79	AI7	C	553	557	Right-handed 310
Helix 80	AI8	C	562	583	Right-handed alpha
Helix 81	AI9	C	607	620	Right-handed alpha
Helix 82	AJ1	C	630	665	Right-handed alpha
Helix 83	AJ2	C	670	677	Right-handed alpha
Helix 84	AJ3	C	690	697	Right-handed alpha
Helix 85	AJ4	C	699	713	Right-handed alpha
Helix 86	AJ5	C	720	731	Right-handed alpha
Helix 87	AJ6	C	739	747	Right-handed alpha
Helix 88	AJ7	C	773	789	Right-handed alpha
Helix 89	AJ8	C	789	800	Right-handed alpha
Helix 90	AJ9	C	801	803	Right-handed 310
Helix 91	AK1	C	824	848	Right-handed alpha
Helix 92	AK2	C	856	867	Right-handed alpha
Helix 93	AK3	D	51	67	Right-handed alpha
Helix 94	AK4	D	88	102	Right-handed alpha
Helix 95	AK5	D	111	126	Right-handed alpha
Helix 96	AK6	D	152	167	Right-handed alpha
Helix 97	AK7	D	179	190	Right-handed alpha
Helix 98	AK8	D	191	194	Right-handed 310
Helix 99	AK9	D	208	210	Right-handed 310
Helix 100	AL1	D	211	222	Right-handed alpha
Helix 101	AL2	D	231	245	Right-handed alpha
Helix 102	AL3	D	286	301	Right-handed alpha
Helix 103	AL4	D	317	335	Right-handed alpha
Helix 104	AL5	D	355	365	Right-handed alpha
Helix 105	AL6	D	415	417	Right-handed 310
Helix 106	AL7	D	461	475	Right-handed alpha
Helix 107	AL8	D	500	507	Right-handed alpha
Helix 108	AL9	D	520	525	Right-handed alpha
Helix 109	AM1	D	560	584	Right-handed alpha
Helix 110	AM2	D	609	620	Right-handed alpha
Helix 111	AM3	D	630	665	Right-handed alpha
Helix 112	AM4	D	670	675	Right-handed alpha
Helix 113	AM5	D	689	695	Right-handed alpha
Helix 114	AM6	D	701	712	Right-handed alpha
Helix 115	AM7	D	720	731	Right-handed alpha
Helix 116	AM8	D	739	749	Right-handed alpha
Helix 117	AM9	D	773	788	Right-handed alpha
Helix 118	AN1	D	789	799	Right-handed alpha
Helix 119	AN2	D	816	821	Right-handed alpha
Helix 120	AN3	D	821	850	Right-handed alpha
Helix 121	AN4	E	348	372	Right-handed alpha

There are 41 sheets in PDB entry 7F57. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	80	first strand
Strand 2	A	35	40	parallel
Strand 3	A	106	107	parallel
Strand 4	A	129	131	parallel
Strand 5	A	146	148	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	176	first strand
Strand 2	A	200	203	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	228	first strand
Strand 2	A	253	256	parallel
Strand 3	A	275	279	parallel
Strand 4	A	391	394	anti-parallel
Strand 5	A	399	401	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	370	first strand
Strand 2	A	373	375	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	437	first strand
Strand 2	A	477	482	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	767	768	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	536	first strand
Strand 2	A	762	764	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	738	first strand
Strand 2	A	538	543	anti-parallel
Strand 3	A	752	755	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	38	first strand
Strand 2	B	75	78	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	43	first strand
Strand 2	B	81	83	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	129	131	parallel
Strand 3	B	146	148	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	203	first strand
Strand 2	B	172	176	parallel
Strand 3	B	225	228	parallel
Strand 4	B	253	256	parallel
Strand 5	B	275	277	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	370	first strand
Strand 2	B	373	374	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	395	first strand
Strand 2	B	398	405	anti-parallel
Strand 3	B	411	413	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	514	first strand
Strand 2	B	766	767	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	535	first strand
Strand 2	B	763	764	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	738	first strand
Strand 2	B	538	543	anti-parallel
Strand 3	B	752	755	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	684	685	first strand
Strand 2	B	717	718	parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	81	first strand
Strand 2	C	34	41	parallel
Strand 3	C	106	107	parallel
Strand 4	C	129	131	parallel
Strand 5	C	146	148	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	203	first strand
Strand 2	C	171	176	parallel
Strand 3	C	226	228	parallel
Strand 4	C	254	256	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	277	280	first strand
Strand 2	C	389	394	anti-parallel
Strand 3	C	399	405	anti-parallel
Strand 4	C	411	413	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	370	first strand
Strand 2	C	373	375	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	478	482	first strand
Strand 2	C	433	437	parallel
Strand 3	C	512	513	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	444	446	first strand
Strand 2	C	459	461	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	528	529	first strand
Strand 2	C	767	768	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	536	first strand
Strand 2	C	762	764	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	737	738	first strand
Strand 2	C	538	543	anti-parallel
Strand 3	C	752	755	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	38	first strand
Strand 2	D	75	78	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	43	first strand
Strand 2	D	81	83	parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	106	107	first strand
Strand 2	D	129	131	parallel
Strand 3	D	146	148	parallel

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There are 8 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	200	203	first strand
Strand 2	D	173	176	parallel
Strand 3	D	225	228	parallel
Strand 4	D	253	256	parallel
Strand 5	D	277	280	parallel
Strand 6	D	389	395	anti-parallel
Strand 7	D	398	406	anti-parallel
Strand 8	D	410	413	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	369	370	first strand
Strand 2	D	373	374	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	433	435	first strand
Strand 2	D	478	480	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	446	first strand
Strand 2	D	459	460	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	528	529	first strand
Strand 2	D	767	768	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	717	718	first strand
Strand 2	D	683	685	parallel
Strand 3	D	735	738	parallel
Strand 4	D	534	543	anti-parallel
Strand 5	D	752	753	anti-parallel

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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	717	718	first strand
Strand 2	D	683	685	parallel
Strand 3	D	735	738	parallel
Strand 4	D	534	543	anti-parallel
Strand 5	D	761	764	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	58	first strand
Strand 2	E	153	159	anti-parallel
Strand 3	E	83	89	anti-parallel
Strand 4	E	130	132	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	72	77	first strand
Strand 2	E	136	141	anti-parallel
Strand 3	E	105	109	anti-parallel
Strand 4	E	117	121	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F57

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F57