Analysis of interatomic Contacts of Structural Units in PDB entry:
7F5A

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F5A entry

There are 6 chains in PDB entry 7F5A (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 33	MET 867
B	THR 33	ALA 850
C	THR 33	MET 867
D	THR 33	ALA 850
E	CYS 45	LYS 376
F	CYS 45	ARG 374

There are123 helices in PDB entry 7F5A. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	87	102	Right-handed alpha
Helix 3	AA3	A	111	126	Right-handed alpha
Helix 4	AA4	A	152	168	Right-handed alpha
Helix 5	AA5	A	179	185	Right-handed alpha
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	191	194	Right-handed 310
Helix 8	AA8	A	207	209	Right-handed 310
Helix 9	AA9	A	210	222	Right-handed alpha
Helix 10	AB1	A	231	245	Right-handed alpha
Helix 11	AB2	A	268	273	Right-handed 310
Helix 12	AB3	A	286	301	Right-handed alpha
Helix 13	AB4	A	306	310	Right-handed 310
Helix 14	AB5	A	317	335	Right-handed alpha
Helix 15	AB6	A	355	366	Right-handed alpha
Helix 16	AB7	A	461	475	Right-handed alpha
Helix 17	AB8	A	499	507	Right-handed alpha
Helix 18	AB9	A	520	525	Right-handed alpha
Helix 19	AC1	A	560	584	Right-handed alpha
Helix 20	AC2	A	607	620	Right-handed alpha
Helix 21	AC3	A	630	665	Right-handed alpha
Helix 22	AC4	A	670	677	Right-handed alpha
Helix 23	AC5	A	689	697	Right-handed alpha
Helix 24	AC6	A	699	713	Right-handed alpha
Helix 25	AC7	A	721	731	Right-handed alpha
Helix 26	AC8	A	739	749	Right-handed alpha
Helix 27	AC9	A	773	789	Right-handed alpha
Helix 28	AD1	A	789	799	Right-handed alpha
Helix 29	AD2	A	824	851	Right-handed alpha
Helix 30	AD3	A	855	866	Right-handed alpha
Helix 31	AD4	B	51	65	Right-handed alpha
Helix 32	AD5	B	88	102	Right-handed alpha
Helix 33	AD6	B	112	126	Right-handed alpha
Helix 34	AD7	B	152	168	Right-handed alpha
Helix 35	AD8	B	179	190	Right-handed alpha
Helix 36	AD9	B	210	222	Right-handed alpha
Helix 37	AE1	B	231	245	Right-handed alpha
Helix 38	AE2	B	260	264	Right-handed 310
Helix 39	AE3	B	269	273	Right-handed 310
Helix 40	AE4	B	286	301	Right-handed alpha
Helix 41	AE5	B	306	310	Right-handed 310
Helix 42	AE6	B	317	337	Right-handed alpha
Helix 43	AE7	B	355	366	Right-handed alpha
Helix 44	AE8	B	450	454	Right-handed 310
Helix 45	AE9	B	461	475	Right-handed alpha
Helix 46	AF1	B	500	506	Right-handed alpha
Helix 47	AF2	B	520	527	Right-handed alpha
Helix 48	AF3	B	551	557	Right-handed alpha
Helix 49	AF4	B	560	585	Right-handed alpha
Helix 50	AF5	B	607	620	Right-handed alpha
Helix 51	AF6	B	631	662	Right-handed alpha
Helix 52	AF7	B	670	675	Right-handed alpha
Helix 53	AF8	B	688	695	Right-handed alpha
Helix 54	AF9	B	701	712	Right-handed alpha
Helix 55	AG1	B	720	731	Right-handed alpha
Helix 56	AG2	B	740	747	Right-handed alpha
Helix 57	AG3	B	773	789	Right-handed alpha
Helix 58	AG4	B	789	799	Right-handed alpha
Helix 59	AG5	B	816	821	Right-handed alpha
Helix 60	AG6	B	821	850	Right-handed alpha
Helix 61	AG7	C	51	67	Right-handed alpha
Helix 62	AG8	C	87	102	Right-handed alpha
Helix 63	AG9	C	111	125	Right-handed alpha
Helix 64	AH1	C	152	168	Right-handed alpha
Helix 65	AH2	C	180	190	Right-handed alpha
Helix 66	AH3	C	191	194	Right-handed 310
Helix 67	AH4	C	210	221	Right-handed alpha
Helix 68	AH5	C	231	245	Right-handed alpha
Helix 69	AH6	C	260	264	Right-handed 310
Helix 70	AH7	C	286	301	Right-handed alpha
Helix 71	AH8	C	317	336	Right-handed alpha
Helix 72	AH9	C	355	366	Right-handed alpha
Helix 73	AI1	C	454	457	Right-handed 310
Helix 74	AI2	C	462	475	Right-handed alpha
Helix 75	AI3	C	499	507	Right-handed alpha
Helix 76	AI4	C	520	526	Right-handed alpha
Helix 77	AI5	C	553	557	Right-handed 310
Helix 78	AI6	C	562	583	Right-handed alpha
Helix 79	AI7	C	607	621	Right-handed alpha
Helix 80	AI8	C	630	663	Right-handed alpha
Helix 81	AI9	C	670	677	Right-handed alpha
Helix 82	AJ1	C	690	697	Right-handed alpha
Helix 83	AJ2	C	699	713	Right-handed alpha
Helix 84	AJ3	C	720	731	Right-handed alpha
Helix 85	AJ4	C	739	747	Right-handed alpha
Helix 86	AJ5	C	773	788	Right-handed alpha
Helix 87	AJ6	C	789	800	Right-handed alpha
Helix 88	AJ7	C	824	848	Right-handed alpha
Helix 89	AJ8	C	856	867	Right-handed alpha
Helix 90	AJ9	D	51	67	Right-handed alpha
Helix 91	AK1	D	88	101	Right-handed alpha
Helix 92	AK2	D	111	124	Right-handed alpha
Helix 93	AK3	D	152	168	Right-handed alpha
Helix 94	AK4	D	179	185	Right-handed alpha
Helix 95	AK5	D	185	190	Right-handed alpha
Helix 96	AK6	D	191	194	Right-handed 310
Helix 97	AK7	D	207	210	Right-handed 310
Helix 98	AK8	D	211	222	Right-handed alpha
Helix 99	AK9	D	231	245	Right-handed alpha
Helix 100	AL1	D	260	264	Right-handed 310
Helix 101	AL2	D	266	270	Right-handed 310
Helix 102	AL3	D	286	301	Right-handed alpha
Helix 103	AL4	D	317	335	Right-handed alpha
Helix 104	AL5	D	355	364	Right-handed alpha
Helix 105	AL6	D	415	417	Right-handed 310
Helix 106	AL7	D	454	457	Right-handed 310
Helix 107	AL8	D	461	475	Right-handed alpha
Helix 108	AL9	D	500	507	Right-handed alpha
Helix 109	AM1	D	520	527	Right-handed alpha
Helix 110	AM2	D	560	584	Right-handed alpha
Helix 111	AM3	D	609	620	Right-handed alpha
Helix 112	AM4	D	633	661	Right-handed alpha
Helix 113	AM5	D	670	675	Right-handed alpha
Helix 114	AM6	D	689	695	Right-handed alpha
Helix 115	AM7	D	702	712	Right-handed alpha
Helix 116	AM8	D	720	731	Right-handed alpha
Helix 117	AM9	D	739	749	Right-handed alpha
Helix 118	AN1	D	773	788	Right-handed alpha
Helix 119	AN2	D	789	800	Right-handed alpha
Helix 120	AN3	D	821	850	Right-handed alpha
Helix 121	AN4	E	340	344	Right-handed alpha
Helix 122	AN5	E	347	372	Right-handed alpha
Helix 123	AN6	F	347	372	Right-handed alpha

There are 46 sheets in PDB entry 7F5A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	83	first strand
Strand 2	A	39	43	parallel
Strand 3	A	106	107	parallel
Strand 4	A	129	131	parallel
Strand 5	A	146	148	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	203	first strand
Strand 2	A	171	176	parallel
Strand 3	A	225	228	parallel
Strand 4	A	253	256	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	278	280	first strand
Strand 2	A	389	394	anti-parallel
Strand 3	A	399	406	anti-parallel
Strand 4	A	410	411	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	369	first strand
Strand 2	A	374	375	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	482	first strand
Strand 2	A	433	437	parallel
Strand 3	A	512	513	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	446	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	536	first strand
Strand 2	A	762	763	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	538	539	first strand
Strand 2	A	737	738	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	38	first strand
Strand 2	B	75	78	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	129	131	parallel
Strand 3	B	146	148	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	176	first strand
Strand 2	B	199	203	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	228	first strand
Strand 2	B	253	256	parallel
Strand 3	B	275	280	parallel
Strand 4	B	390	395	anti-parallel
Strand 5	B	398	401	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	369	370	first strand
Strand 2	B	373	374	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	436	437	first strand
Strand 2	B	481	482	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	513	514	first strand
Strand 2	B	766	767	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	536	first strand
Strand 2	B	762	764	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	540	543	first strand
Strand 2	B	752	755	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	83	first strand
Strand 2	C	39	43	parallel
Strand 3	C	106	107	parallel
Strand 4	C	129	130	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	176	first strand
Strand 2	C	198	203	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	225	228	first strand
Strand 2	C	253	256	parallel
Strand 3	C	276	277	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	370	first strand
Strand 2	C	373	375	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	392	395	first strand
Strand 2	C	398	401	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	437	first strand
Strand 2	C	478	482	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	444	446	first strand
Strand 2	C	459	461	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	737	738	first strand
Strand 2	C	538	543	anti-parallel
Strand 3	C	752	755	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	36	first strand
Strand 2	D	75	76	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	40	first strand
Strand 2	D	106	107	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	43	first strand
Strand 2	D	82	83	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	173	176	first strand
Strand 2	D	200	203	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	369	370	first strand
Strand 2	D	373	374	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	392	394	first strand
Strand 2	D	399	401	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	403	405	first strand
Strand 2	D	411	413	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	445	446	first strand
Strand 2	D	459	460	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	514	518	first strand
Strand 2	D	763	768	anti-parallel
Strand 3	D	528	529	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	514	518	first strand
Strand 2	D	763	768	anti-parallel
Strand 3	D	534	535	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	735	738	first strand
Strand 2	D	538	543	anti-parallel
Strand 3	D	752	755	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	684	685	first strand
Strand 2	D	717	718	parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	58	first strand
Strand 2	E	153	159	anti-parallel
Strand 3	E	83	87	anti-parallel
Strand 4	E	130	132	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	77	first strand
Strand 2	E	136	142	anti-parallel
Strand 3	E	105	109	anti-parallel
Strand 4	E	117	121	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	179	180	first strand
Strand 2	E	206	212	parallel
Strand 3	E	269	275	anti-parallel
Strand 4	E	238	243	anti-parallel
Strand 5	E	251	255	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	185	186	first strand
Strand 2	E	285	290	anti-parallel
Strand 3	E	219	226	anti-parallel
Strand 4	E	263	265	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	54	58	first strand
Strand 2	F	153	159	anti-parallel
Strand 3	F	83	87	anti-parallel
Strand 4	F	130	132	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	77	first strand
Strand 2	F	136	142	anti-parallel
Strand 3	F	105	109	anti-parallel
Strand 4	F	117	121	anti-parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	178	180	first strand
Strand 2	F	206	212	parallel
Strand 3	F	269	275	anti-parallel
Strand 4	F	238	242	anti-parallel
Strand 5	F	251	253	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	185	188	first strand
Strand 2	F	285	290	anti-parallel
Strand 3	F	220	226	anti-parallel
Strand 4	F	263	264	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F5A

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F5A