Analysis of interatomic Contacts of Structural Units in PDB entry:
7F5U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F5U entry

There are 4 chains in PDB entry 7F5U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 45	ASP 776
B	PRO 45	ASP 776
C	PRO 45	ASP 776
D	PRO 45	ASP 776

There are116 helices in PDB entry 7F5U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	56	Right-handed 310
Helix 2	AA2	A	64	69	Right-handed alpha
Helix 3	AA3	A	77	94	Right-handed alpha
Helix 4	AA4	A	104	119	Right-handed alpha
Helix 5	AA5	A	124	128	Right-handed 310
Helix 6	AA6	A	142	163	Right-handed alpha
Helix 7	AA7	A	175	179	Right-handed 310
Helix 8	AA8	A	180	197	Right-handed alpha
Helix 9	AA9	A	232	245	Right-handed alpha
Helix 10	AB1	A	297	307	Right-handed alpha
Helix 11	AB2	A	321	328	Right-handed alpha
Helix 12	AB3	A	348	364	Right-handed alpha
Helix 13	AB4	A	368	384	Right-handed alpha
Helix 14	AB5	A	384	403	Right-handed alpha
Helix 15	AB6	A	405	412	Right-handed alpha
Helix 16	AB7	A	415	433	Right-handed alpha
Helix 17	AB8	A	471	484	Right-handed alpha
Helix 18	AB9	A	495	513	Right-handed alpha
Helix 19	AC1	A	527	534	Right-handed alpha
Helix 20	AC2	A	546	557	Right-handed alpha
Helix 21	AC3	A	579	592	Right-handed alpha
Helix 22	AC4	A	609	613	Right-handed 310
Helix 23	AC5	A	614	626	Right-handed alpha
Helix 24	AC6	A	633	640	Right-handed alpha
Helix 25	AC7	A	666	678	Right-handed alpha
Helix 26	AC8	A	689	700	Right-handed alpha
Helix 27	AC9	A	710	714	Right-handed 310
Helix 28	AD1	A	740	742	Right-handed 310
Helix 29	AD2	A	756	761	Right-handed alpha
Helix 30	AD3	B	51	56	Right-handed 310
Helix 31	AD4	B	64	69	Right-handed alpha
Helix 32	AD5	B	77	94	Right-handed alpha
Helix 33	AD6	B	104	119	Right-handed alpha
Helix 34	AD7	B	124	128	Right-handed 310
Helix 35	AD8	B	142	163	Right-handed alpha
Helix 36	AD9	B	175	179	Right-handed 310
Helix 37	AE1	B	180	197	Right-handed alpha
Helix 38	AE2	B	232	245	Right-handed alpha
Helix 39	AE3	B	297	307	Right-handed alpha
Helix 40	AE4	B	321	328	Right-handed alpha
Helix 41	AE5	B	348	364	Right-handed alpha
Helix 42	AE6	B	368	384	Right-handed alpha
Helix 43	AE7	B	384	403	Right-handed alpha
Helix 44	AE8	B	405	412	Right-handed alpha
Helix 45	AE9	B	415	433	Right-handed alpha
Helix 46	AF1	B	471	484	Right-handed alpha
Helix 47	AF2	B	495	513	Right-handed alpha
Helix 48	AF3	B	527	534	Right-handed alpha
Helix 49	AF4	B	546	557	Right-handed alpha
Helix 50	AF5	B	579	592	Right-handed alpha
Helix 51	AF6	B	609	613	Right-handed 310
Helix 52	AF7	B	614	626	Right-handed alpha
Helix 53	AF8	B	633	640	Right-handed alpha
Helix 54	AF9	B	666	678	Right-handed alpha
Helix 55	AG1	B	689	700	Right-handed alpha
Helix 56	AG2	B	710	714	Right-handed 310
Helix 57	AG3	B	740	742	Right-handed 310
Helix 58	AG4	B	756	761	Right-handed alpha
Helix 59	AG5	C	51	56	Right-handed 310
Helix 60	AG6	C	64	69	Right-handed alpha
Helix 61	AG7	C	77	94	Right-handed alpha
Helix 62	AG8	C	104	119	Right-handed alpha
Helix 63	AG9	C	124	128	Right-handed 310
Helix 64	AH1	C	142	163	Right-handed alpha
Helix 65	AH2	C	175	179	Right-handed 310
Helix 66	AH3	C	180	197	Right-handed alpha
Helix 67	AH4	C	232	245	Right-handed alpha
Helix 68	AH5	C	297	307	Right-handed alpha
Helix 69	AH6	C	321	328	Right-handed alpha
Helix 70	AH7	C	348	364	Right-handed alpha
Helix 71	AH8	C	368	384	Right-handed alpha
Helix 72	AH9	C	384	403	Right-handed alpha
Helix 73	AI1	C	405	412	Right-handed alpha
Helix 74	AI2	C	415	433	Right-handed alpha
Helix 75	AI3	C	471	484	Right-handed alpha
Helix 76	AI4	C	495	513	Right-handed alpha
Helix 77	AI5	C	527	534	Right-handed alpha
Helix 78	AI6	C	546	557	Right-handed alpha
Helix 79	AI7	C	579	592	Right-handed alpha
Helix 80	AI8	C	609	613	Right-handed 310
Helix 81	AI9	C	614	626	Right-handed alpha
Helix 82	AJ1	C	633	640	Right-handed alpha
Helix 83	AJ2	C	666	678	Right-handed alpha
Helix 84	AJ3	C	689	700	Right-handed alpha
Helix 85	AJ4	C	710	714	Right-handed 310
Helix 86	AJ5	C	740	742	Right-handed 310
Helix 87	AJ6	C	756	761	Right-handed alpha
Helix 88	AJ7	D	51	56	Right-handed 310
Helix 89	AJ8	D	64	69	Right-handed alpha
Helix 90	AJ9	D	77	94	Right-handed alpha
Helix 91	AK1	D	104	119	Right-handed alpha
Helix 92	AK2	D	124	128	Right-handed 310
Helix 93	AK3	D	142	163	Right-handed alpha
Helix 94	AK4	D	175	179	Right-handed 310
Helix 95	AK5	D	180	197	Right-handed alpha
Helix 96	AK6	D	232	245	Right-handed alpha
Helix 97	AK7	D	297	307	Right-handed alpha
Helix 98	AK8	D	321	328	Right-handed alpha
Helix 99	AK9	D	348	364	Right-handed alpha
Helix 100	AL1	D	368	384	Right-handed alpha
Helix 101	AL2	D	384	403	Right-handed alpha
Helix 102	AL3	D	405	412	Right-handed alpha
Helix 103	AL4	D	415	433	Right-handed alpha
Helix 104	AL5	D	471	484	Right-handed alpha
Helix 105	AL6	D	495	513	Right-handed alpha
Helix 106	AL7	D	527	534	Right-handed alpha
Helix 107	AL8	D	546	557	Right-handed alpha
Helix 108	AL9	D	579	592	Right-handed alpha
Helix 109	AM1	D	609	613	Right-handed 310
Helix 110	AM2	D	614	626	Right-handed alpha
Helix 111	AM3	D	633	640	Right-handed alpha
Helix 112	AM4	D	666	678	Right-handed alpha
Helix 113	AM5	D	689	700	Right-handed alpha
Helix 114	AM6	D	710	714	Right-handed 310
Helix 115	AM7	D	740	742	Right-handed 310
Helix 116	AM8	D	756	761	Right-handed alpha

There are 36 sheets in PDB entry 7F5U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	97	98	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	173	first strand
Strand 2	A	203	205	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	250	first strand
Strand 2	A	311	313	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	273	274	first strand
Strand 2	A	335	336	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	744	751	first strand
Strand 2	A	450	458	anti-parallel
Strand 3	A	443	447	anti-parallel
Strand 4	A	771	772	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	521	first strand
Strand 2	A	487	490	parallel
Strand 3	A	462	465	parallel
Strand 4	A	540	543	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	662	664	first strand
Strand 2	A	605	607	parallel
Strand 3	A	572	574	parallel
Strand 4	A	684	686	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	630	first strand
Strand 2	A	658	659	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	726	728	first strand
Strand 2	A	736	738	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	59	first strand
Strand 2	B	97	98	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	173	first strand
Strand 2	B	203	205	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	250	first strand
Strand 2	B	311	313	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	274	first strand
Strand 2	B	335	336	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	744	751	first strand
Strand 2	B	450	458	anti-parallel
Strand 3	B	443	447	anti-parallel
Strand 4	B	771	772	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	521	first strand
Strand 2	B	487	490	parallel
Strand 3	B	462	465	parallel
Strand 4	B	540	543	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	662	664	first strand
Strand 2	B	605	607	parallel
Strand 3	B	572	574	parallel
Strand 4	B	684	686	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	629	630	first strand
Strand 2	B	658	659	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	726	728	first strand
Strand 2	B	736	738	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	59	first strand
Strand 2	C	97	98	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	173	first strand
Strand 2	C	203	205	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	250	first strand
Strand 2	C	311	313	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	274	first strand
Strand 2	C	335	336	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	744	751	first strand
Strand 2	C	450	458	anti-parallel
Strand 3	C	443	447	anti-parallel
Strand 4	C	771	772	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	520	521	first strand
Strand 2	C	487	490	parallel
Strand 3	C	462	465	parallel
Strand 4	C	540	543	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	662	664	first strand
Strand 2	C	605	607	parallel
Strand 3	C	572	574	parallel
Strand 4	C	684	686	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	629	630	first strand
Strand 2	C	658	659	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	726	728	first strand
Strand 2	C	736	738	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	59	first strand
Strand 2	D	97	98	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	173	first strand
Strand 2	D	203	205	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	250	first strand
Strand 2	D	311	313	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	273	274	first strand
Strand 2	D	335	336	parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	744	751	first strand
Strand 2	D	450	458	anti-parallel
Strand 3	D	443	447	anti-parallel
Strand 4	D	771	772	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	520	521	first strand
Strand 2	D	487	490	parallel
Strand 3	D	462	465	parallel
Strand 4	D	540	543	parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	662	664	first strand
Strand 2	D	605	607	parallel
Strand 3	D	572	574	parallel
Strand 4	D	684	686	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	629	630	first strand
Strand 2	D	658	659	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	726	728	first strand
Strand 2	D	736	738	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F5U

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F5U