Analysis of interatomic Contacts of Structural Units in PDB entry:
7F5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F5W entry

There are 2 chains in PDB entry 7F5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0TYR 268
B
 PRO 1TYR 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7F5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 10Right-handed alpha
Helix 2
AA2
A
31 36Right-handed 310
Helix 3
AA3
A
38 42Right-handed 310
Helix 4
AA4
A
60 64Right-handed 310
Helix 5
AA5
A
67 70Right-handed 310
Helix 6
AA6
A
71 86Right-handed alpha
Helix 7
AA7
A
97 110Right-handed alpha
Helix 8
AA8
A
137 151Right-handed alpha
Helix 9
AA9
A
151 165Right-handed alpha
Helix 10
AB1
A
168 182Right-handed alpha
Helix 11
AB2
A
183 196Right-handed alpha
Helix 12
AB3
A
199 206Right-handed 310
Helix 13
AB4
A
223 233Right-handed alpha
Helix 14
AB5
A
248 253Right-handed alpha
Helix 15
AB6
A
253 265Right-handed alpha
Helix 16
AB7
B
2 10Right-handed alpha
Helix 17
AB8
B
31 36Right-handed 310
Helix 18
AB9
B
38 42Right-handed 310
Helix 19
AC1
B
60 64Right-handed 310
Helix 20
AC2
B
67 70Right-handed 310
Helix 21
AC3
B
71 86Right-handed alpha
Helix 22
AC4
B
97 110Right-handed alpha
Helix 23
AC5
B
137 151Right-handed alpha
Helix 24
AC6
B
151 165Right-handed alpha
Helix 25
AC7
B
168 181Right-handed alpha
Helix 26
AC8
B
183 196Right-handed alpha
Helix 27
AC9
B
199 206Right-handed 310
Helix 28
AD1
B
222 233Right-handed alpha
Helix 29
AD2
B
248 253Right-handed alpha
Helix 30
AD3
B
253 265Right-handed alpha
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There are 2 sheets in PDB entry 7F5W. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
47 50anti-parallel
Strand 3
A
21 25parallel
Strand 4
A
91 96parallel
Strand 5
A
114 120parallel
Strand 6
A
210 215parallel
Strand 7
A
237 242parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
46 50anti-parallel
Strand 3
B
20 25parallel
Strand 4
B
91 96parallel
Strand 5
B
114 120parallel
Strand 6
B
210 214parallel
Strand 7
B
237 241parallel
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