Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F6G entry

There are 5 chains in PDB entry 7F6G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 11	ILE 320
L	ARG 2	PHE 8
B	LEU 11	VAL 359
C	GLU 3	ASN 340
D	SER 8	GLU 63

There are 35 helices in PDB entry 7F6G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	56	Right-handed alpha
Helix 2	AA2	A	61	80	Right-handed alpha
Helix 3	AA3	A	80	90	Right-handed alpha
Helix 4	AA4	A	97	132	Right-handed alpha
Helix 5	AA5	A	135	140	Right-handed alpha
Helix 6	AA6	A	141	167	Right-handed alpha
Helix 7	AA7	A	189	202	Right-handed alpha
Helix 8	AA8	A	204	230	Right-handed alpha
Helix 9	AA9	A	234	269	Right-handed alpha
Helix 10	AB1	A	273	292	Right-handed alpha
Helix 11	AB2	A	292	302	Right-handed alpha
Helix 12	AB3	A	306	320	Right-handed alpha
Helix 13	AB4	B	12	36	Right-handed alpha
Helix 14	AB5	B	51	63	Right-handed alpha
Helix 15	AB6	B	68	97	Right-handed alpha
Helix 16	AB7	B	103	116	Right-handed alpha
Helix 17	AB8	B	125	138	Right-handed alpha
Helix 18	AB9	B	138	147	Right-handed alpha
Helix 19	AC1	B	156	163	Right-handed alpha
Helix 20	AC2	B	163	169	Right-handed alpha
Helix 21	AC3	B	175	182	Right-handed alpha
Helix 22	AC4	B	212	217	Right-handed alpha
Helix 23	AC5	B	218	221	Right-handed 310
Helix 24	AC6	B	233	235	Right-handed 310
Helix 25	AC7	B	247	261	Right-handed alpha
Helix 26	AC8	B	262	267	Right-handed 310
Helix 27	AC9	B	275	283	Right-handed alpha
Helix 28	AD1	B	301	316	Right-handed alpha
Helix 29	AD2	B	335	356	Right-handed alpha
Helix 30	AD3	C	4	25	Right-handed alpha
Helix 31	AD4	C	29	34	Right-handed alpha
Helix 32	AD5	C	35	37	Right-handed 310
Helix 33	AD6	D	9	24	Right-handed alpha
Helix 34	AD7	D	29	44	Right-handed alpha
Helix 35	AD8	D	55	59	Right-handed 310

There are 10 sheets in PDB entry 7F6G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	14	first strand
Strand 2	A	168	172	parallel
Strand 3	A	177	184	anti-parallel
Strand 4	L	2	4	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	195	first strand
Strand 2	B	200	205	anti-parallel
Strand 3	B	39	46	parallel
Strand 4	B	225	231	parallel
Strand 5	B	268	274	parallel
Strand 6	B	324	328	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	239	first strand
Strand 2	B	245	246	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	51	first strand
Strand 2	C	336	339	anti-parallel
Strand 3	C	327	331	anti-parallel
Strand 4	C	315	320	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	63	first strand
Strand 2	C	69	74	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	88	94	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	105	first strand
Strand 2	C	111	116	anti-parallel
Strand 3	C	121	125	anti-parallel
Strand 4	C	134	139	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	151	first strand
Strand 2	C	157	161	anti-parallel
Strand 3	C	166	169	anti-parallel
Strand 4	C	176	180	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	192	first strand
Strand 2	C	198	203	anti-parallel
Strand 3	C	208	212	anti-parallel
Strand 4	C	218	222	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	234	first strand
Strand 2	C	240	245	anti-parallel
Strand 3	C	250	254	anti-parallel
Strand 4	C	259	264	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	278	first strand
Strand 2	C	284	289	anti-parallel
Strand 3	C	294	298	anti-parallel
Strand 4	C	304	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F6G

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6G