Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F6H entry

There are 5 chains in PDB entry 7F6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 47CYS 351
L
 ARG 1ARG 9
B
 GLU 14VAL 359
C
 ALA 11ASN 340
D
 LEU 15PHE 61
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7F6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 85Right-handed alpha
Helix 2
AA2
A
90 119Right-handed alpha
Helix 3
AA3
A
126 160Right-handed alpha
Helix 4
AA4
A
170 196Right-handed alpha
Helix 5
AA5
A
217 230Right-handed alpha
Helix 6
AA6
A
233 254Right-handed alpha
Helix 7
AA7
A
265 298Right-handed alpha
Helix 8
AA8
A
303 318Right-handed alpha
Helix 9
AA9
A
319 333Right-handed alpha
Helix 10
AB1
A
336 351Right-handed alpha
Helix 11
AB2
B
15 37Right-handed alpha
Helix 12
AB3
B
51 63Right-handed alpha
Helix 13
AB4
B
212 217Right-handed alpha
Helix 14
AB5
B
218 221Right-handed 310
Helix 15
AB6
B
233 237Right-handed 310
Helix 16
AB7
B
246 261Right-handed alpha
Helix 17
AB8
B
262 265Right-handed 310
Helix 18
AB9
B
275 283Right-handed alpha
Helix 19
AC1
B
303 315Right-handed alpha
Helix 20
AC2
B
335 356Right-handed alpha
Helix 21
AC3
C
12 25Right-handed alpha
Helix 22
AC4
C
29 34Right-handed alpha
Helix 23
AC5
D
16 24Right-handed alpha
Helix 24
AC6
D
29 44Right-handed alpha
Helix 25
AC7
D
55 59Right-handed 310
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There are 9 sheets in PDB entry 7F6H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 201first strand
Strand 2
A
208 209anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 195first strand
Strand 2
B
200 205anti-parallel
Strand 3
B
39 46parallel
Strand 4
B
225 231parallel
Strand 5
B
268 274parallel
Strand 6
B
324 328parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 52first strand
Strand 2
C
335 340anti-parallel
Strand 3
C
327 331anti-parallel
Strand 4
C
315 320anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
69 74anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
88 94anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 105first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
121 125anti-parallel
Strand 4
C
134 139anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 151first strand
Strand 2
C
156 161anti-parallel
Strand 3
C
166 170anti-parallel
Strand 4
C
176 180anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
187 192first strand
Strand 2
C
198 203anti-parallel
Strand 3
C
207 212anti-parallel
Strand 4
C
218 223anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 234first strand
Strand 2
C
240 245anti-parallel
Strand 3
C
250 254anti-parallel
Strand 4
C
259 264anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 278first strand
Strand 2
C
284 289anti-parallel
Strand 3
C
294 298anti-parallel
Strand 4
C
304 308anti-parallel
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