Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F6I entry

There are 5 chains in PDB entry 7F6I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 47	CYS 351
L	LYS 1	ARG 10
B	GLU 14	VAL 359
C	LEU 14	ASN 340
D	LEU 15	ARG 62

There are 29 helices in PDB entry 7F6I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	50	85	Right-handed alpha
Helix 2	AA2	A	90	108	Right-handed alpha
Helix 3	AA3	A	109	119	Right-handed alpha
Helix 4	AA4	A	125	160	Right-handed alpha
Helix 5	AA5	A	165	169	Right-handed 310
Helix 6	AA6	A	170	189	Right-handed alpha
Helix 7	AA7	A	189	195	Right-handed alpha
Helix 8	AA8	A	217	230	Right-handed alpha
Helix 9	AA9	A	233	252	Right-handed alpha
Helix 10	AB1	A	253	257	Right-handed 310
Helix 11	AB2	A	264	298	Right-handed alpha
Helix 12	AB3	A	303	321	Right-handed alpha
Helix 13	AB4	A	322	333	Right-handed alpha
Helix 14	AB5	A	336	351	Right-handed alpha
Helix 15	AB6	B	15	36	Right-handed alpha
Helix 16	AB7	B	51	63	Right-handed alpha
Helix 17	AB8	B	212	217	Right-handed alpha
Helix 18	AB9	B	218	221	Right-handed 310
Helix 19	AC1	B	246	261	Right-handed alpha
Helix 20	AC2	B	262	265	Right-handed 310
Helix 21	AC3	B	276	283	Right-handed alpha
Helix 22	AC4	B	302	315	Right-handed alpha
Helix 23	AC5	B	335	356	Right-handed alpha
Helix 24	AC6	C	15	25	Right-handed alpha
Helix 25	AC7	C	29	34	Right-handed alpha
Helix 26	AC8	C	35	37	Right-handed 310
Helix 27	AC9	D	16	24	Right-handed alpha
Helix 28	AD1	D	29	45	Right-handed alpha
Helix 29	AD2	D	46	48	Right-handed 310

There are 9 sheets in PDB entry 7F6I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	201	first strand
Strand 2	A	208	213	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	196	first strand
Strand 2	B	199	205	anti-parallel
Strand 3	B	39	46	parallel
Strand 4	B	225	231	parallel
Strand 5	B	268	274	parallel
Strand 6	B	324	328	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	51	first strand
Strand 2	C	336	340	anti-parallel
Strand 3	C	327	331	anti-parallel
Strand 4	C	315	320	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	63	first strand
Strand 2	C	69	74	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	88	94	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	105	first strand
Strand 2	C	111	116	anti-parallel
Strand 3	C	121	125	anti-parallel
Strand 4	C	134	139	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	153	first strand
Strand 2	C	156	161	anti-parallel
Strand 3	C	166	168	anti-parallel
Strand 4	C	178	180	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	192	first strand
Strand 2	C	198	203	anti-parallel
Strand 3	C	208	212	anti-parallel
Strand 4	C	218	222	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	234	first strand
Strand 2	C	240	245	anti-parallel
Strand 3	C	250	254	anti-parallel
Strand 4	C	260	264	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	278	first strand
Strand 2	C	284	289	anti-parallel
Strand 3	C	294	298	anti-parallel
Strand 4	C	304	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F6I

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6I