Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F6J entry

There are 3 chains in PDB entry 7F6J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7GLU 177
B
 LYS 6THR 178
C
 ILE 999LEU 1104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7F6J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 31Right-handed alpha
Helix 2
AA2
A
67 71Right-handed 310
Helix 3
AA3
A
74 80Right-handed alpha
Helix 4
AA4
A
92 98Right-handed alpha
Helix 5
AA5
A
98 111Right-handed alpha
Helix 6
AA6
A
114 118Right-handed 310
Helix 7
AA7
A
135 146Right-handed alpha
Helix 8
AA8
A
161 177Right-handed alpha
Helix 9
AA9
B
20 31Right-handed alpha
Helix 10
AB1
B
73 78Right-handed alpha
Helix 11
AB2
B
92 98Right-handed alpha
Helix 12
AB3
B
98 111Right-handed alpha
Helix 13
AB4
B
114 118Right-handed 310
Helix 14
AB5
B
126 130Right-handed 310
Helix 15
AB6
B
135 146Right-handed alpha
Helix 16
AB7
B
161 176Right-handed alpha
Helix 17
AB8
C
1009 1021Right-handed alpha
Helix 18
AB9
C
1028 1064Right-handed alpha
Helix 19
AC1
C
1066 1104Right-handed alpha
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There are 2 sheets in PDB entry 7F6J. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 52first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
8 14parallel
Strand 4
A
83 89parallel
Strand 5
A
120 125parallel
Strand 6
A
151 153parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 52first strand
Strand 2
B
55 63anti-parallel
Strand 3
B
8 14parallel
Strand 4
B
83 89parallel
Strand 5
B
120 125parallel
Strand 6
B
151 153parallel
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