Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F6L entry

There are 2 chains in PDB entry 7F6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 259THR 551
B
 ALA 63GLY 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7F6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
287 294Right-handed alpha
Helix 2
AA2
A
337 346Right-handed alpha
Helix 3
AA3
A
347 358Right-handed alpha
Helix 4
AA4
A
380 394Right-handed alpha
Helix 5
AA5
A
404 423Right-handed alpha
Helix 6
AA6
A
456 468Right-handed alpha
Helix 7
AA7
A
470 480Right-handed alpha
Helix 8
AA8
A
486 497Right-handed alpha
Helix 9
AA9
A
499 510Right-handed alpha
Helix 10
AB1
A
512 518Right-handed alpha
Helix 11
AB2
A
535 546Right-handed alpha
Helix 12
AB3
B
82 89Right-handed 310
Helix 13
AB4
B
90 98Right-handed alpha
Helix 14
AB5
B
146 157Right-handed alpha
Helix 15
AB6
B
184 193Right-handed alpha
Helix 16
AB7
B
215 231Right-handed alpha
Helix 17
AB8
B
239 265Right-handed alpha
Helix 18
AB9
B
288 299Right-handed alpha
Helix 19
AC1
B
304 315Right-handed alpha
Helix 20
AC2
B
318 327Right-handed alpha
Helix 21
AC3
B
330 336Right-handed alpha
Helix 22
AC4
B
355 367Right-handed alpha
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There are 5 sheets in PDB entry 7F6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 262first strand
Strand 2
A
428 429anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 300first strand
Strand 2
A
268 273parallel
Strand 3
A
308 313anti-parallel
Strand 4
A
326 336anti-parallel
Strand 5
A
364 369parallel
Strand 6
A
398 402parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 300first strand
Strand 2
A
268 273parallel
Strand 3
A
308 313anti-parallel
Strand 4
A
326 336anti-parallel
Strand 5
A
454 455anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 106first strand
Strand 2
B
76 80parallel
Strand 3
B
114 119anti-parallel
Strand 4
B
141 145anti-parallel
Strand 5
B
178 183parallel
Strand 6
B
234 237parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
342 343first strand
Strand 2
B
352 353anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il