Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F6U entry

There is 1 chain in PDB entry 7F6U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0ARG 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7F6U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 4Right-handed 310
Helix 2
AA2
A
8 19Right-handed alpha
Helix 3
AA3
A
28 43Right-handed alpha
Helix 4
AA4
A
54 68Right-handed alpha
Helix 5
AA5
A
80 89Right-handed alpha
Helix 6
AA6
A
105 109Right-handed 310
Helix 7
AA7
A
132 136Right-handed 310
Helix 8
AA8
A
139 147Right-handed alpha
Helix 9
AA9
A
148 153Right-handed 310
Helix 10
AB1
A
164 178Right-handed alpha
Helix 11
AB2
A
179 192Right-handed alpha
Helix 12
AB3
A
198 208Right-handed alpha
Helix 13
AB4
A
219 229Right-handed alpha
Helix 14
AB5
A
256 269Right-handed alpha
Helix 15
AB6
A
269 280Right-handed alpha
Helix 16
AB7
A
294 303Right-handed alpha
Helix 17
AB8
A
304 306Right-handed 310
Helix 18
AB9
A
314 321Right-handed 310
Helix 19
AC1
A
322 338Right-handed alpha
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There are 3 sheets in PDB entry 7F6U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 52first strand
Strand 2
A
20 25parallel
Strand 3
A
75 78parallel
Strand 4
A
247 250anti-parallel
Strand 5
A
115 116anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
156 159parallel
Strand 3
A
213 218parallel
Strand 4
A
120 127anti-parallel
Strand 5
A
232 235anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
156 159parallel
Strand 3
A
213 218parallel
Strand 4
A
120 127anti-parallel
Strand 5
A
241 244anti-parallel
Strand 6
A
308 310parallel
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