Analysis of interatomic Contacts of Structural Units in PDB entry:
7F6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F6W entry

There is 1 chain in PDB entry 7F6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 69PRO 578
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7F6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 88Right-handed alpha
Helix 2
AA2
A
102 110Right-handed alpha
Helix 3
AA3
A
159 161Right-handed 310
Helix 4
AA4
A
163 165Right-handed 310
Helix 5
AA5
A
166 173Right-handed alpha
Helix 6
AA6
A
226 232Right-handed alpha
Helix 7
AA7
A
232 240Right-handed alpha
Helix 8
AA8
A
241 263Right-handed alpha
Helix 9
AA9
A
303 314Right-handed alpha
Helix 10
AB1
A
349 370Right-handed alpha
Helix 11
AB2
A
400 409Right-handed alpha
Helix 12
AB3
A
420 434Right-handed alpha
Helix 13
AB4
A
443 457Right-handed alpha
Helix 14
AB5
A
469 473Right-handed 310
Helix 15
AB6
A
507 524Right-handed alpha
Helix 16
AB7
A
533 544Right-handed alpha
Helix 17
AB8
A
554 562Right-handed alpha
Helix 18
AB9
A
566 570Right-handed 310
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There are 4 sheets in PDB entry 7F6W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 136first strand
Strand 2
A
140 147anti-parallel
Strand 3
A
150 157anti-parallel
Strand 4
A
199 210parallel
Strand 5
A
179 188anti-parallel
Strand 6
A
118 136anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 268first strand
Strand 2
A
317 325parallel
Strand 3
A
337 346anti-parallel
Strand 4
A
547 553anti-parallel
Strand 5
A
496 503anti-parallel
Strand 6
A
488 493anti-parallel
Strand 7
A
463 466anti-parallel
Strand 8
A
396 399parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 275first strand
Strand 2
A
295 299anti-parallel
Strand 3
A
287 290anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
387 390anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il