Analysis of interatomic Contacts of Structural Units in PDB entry:
7F77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F77 entry

There are 3 chains in PDB entry 7F77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3PHE 456
B
 LEU 3PHE 456
C
 GLU 6PHE 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7F77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 22Right-handed alpha
Helix 2
AA2
A
24 29Right-handed alpha
Helix 3
AA3
A
30 34Right-handed 310
Helix 4
AA4
A
35 40Right-handed alpha
Helix 5
AA5
A
87 105Right-handed alpha
Helix 6
AA6
A
124 140Right-handed alpha
Helix 7
AA7
A
141 143Right-handed 310
Helix 8
AA8
A
157 173Right-handed alpha
Helix 9
AA9
A
194 212Right-handed alpha
Helix 10
AB1
A
229 242Right-handed alpha
Helix 11
AB2
A
263 275Right-handed alpha
Helix 12
AB3
A
279 287Right-handed alpha
Helix 13
AB4
A
304 309Right-handed 310
Helix 14
AB5
A
325 335Right-handed alpha
Helix 15
AB6
A
349 359Right-handed alpha
Helix 16
AB7
A
359 364Right-handed alpha
Helix 17
AB8
A
369 374Right-handed alpha
Helix 18
AB9
A
375 386Right-handed alpha
Helix 19
AC1
A
395 421Right-handed alpha
Helix 20
AC2
A
432 452Right-handed alpha
Helix 21
AC3
B
6 22Right-handed alpha
Helix 22
AC4
B
24 29Right-handed alpha
Helix 23
AC5
B
30 34Right-handed 310
Helix 24
AC6
B
35 40Right-handed alpha
Helix 25
AC7
B
87 105Right-handed alpha
Helix 26
AC8
B
124 140Right-handed alpha
Helix 27
AC9
B
141 143Right-handed 310
Helix 28
AD1
B
157 173Right-handed alpha
Helix 29
AD2
B
194 212Right-handed alpha
Helix 30
AD3
B
229 242Right-handed alpha
Helix 31
AD4
B
263 276Right-handed alpha
Helix 32
AD5
B
288 292Right-handed 310
Helix 33
AD6
B
304 309Right-handed 310
Helix 34
AD7
B
325 335Right-handed alpha
Helix 35
AD8
B
349 359Right-handed alpha
Helix 36
AD9
B
359 364Right-handed alpha
Helix 37
AE1
B
369 374Right-handed alpha
Helix 38
AE2
B
375 387Right-handed alpha
Helix 39
AE3
B
395 421Right-handed alpha
Helix 40
AE4
B
432 452Right-handed alpha
Helix 41
AE5
C
7 22Right-handed alpha
Helix 42
AE6
C
24 29Right-handed alpha
Helix 43
AE7
C
30 34Right-handed 310
Helix 44
AE8
C
35 40Right-handed alpha
Helix 45
AE9
C
87 105Right-handed alpha
Helix 46
AF1
C
124 140Right-handed alpha
Helix 47
AF2
C
141 143Right-handed 310
Helix 48
AF3
C
157 173Right-handed alpha
Helix 49
AF4
C
194 212Right-handed alpha
Helix 50
AF5
C
229 242Right-handed alpha
Helix 51
AF6
C
263 275Right-handed alpha
Helix 52
AF7
C
279 287Right-handed alpha
Helix 53
AF8
C
287 293Right-handed alpha
Helix 54
AF9
C
304 309Right-handed 310
Helix 55
AG1
C
325 335Right-handed alpha
Helix 56
AG2
C
349 359Right-handed alpha
Helix 57
AG3
C
359 364Right-handed alpha
Helix 58
AG4
C
369 374Right-handed alpha
Helix 59
AG5
C
375 384Right-handed alpha
Helix 60
AG6
C
396 421Right-handed alpha
Helix 61
AG7
C
432 452Right-handed alpha
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There are 7 sheets in PDB entry 7F77. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 53first strand
Strand 2
A
59 70anti-parallel
Strand 3
A
110 116anti-parallel
Strand 4
A
76 82parallel
Strand 5
A
148 152parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 301first strand
Strand 2
A
254 257anti-parallel
Strand 3
A
245 250anti-parallel
Strand 4
A
222 226parallel
Strand 5
A
314 317parallel
Strand 6
A
339 341parallel
Strand 7
A
366 368parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 53first strand
Strand 2
B
59 70anti-parallel
Strand 3
B
110 116anti-parallel
Strand 4
B
76 82parallel
Strand 5
B
148 152parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 246first strand
Strand 2
B
222 225parallel
Strand 3
B
314 316parallel
Strand 4
B
339 341parallel
Strand 5
B
366 368parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 250first strand
Strand 2
B
254 257anti-parallel
Strand 3
B
298 301anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 53first strand
Strand 2
C
59 70anti-parallel
Strand 3
C
110 116anti-parallel
Strand 4
C
76 82parallel
Strand 5
C
148 152parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
298 301first strand
Strand 2
C
254 257anti-parallel
Strand 3
C
245 250anti-parallel
Strand 4
C
222 226parallel
Strand 5
C
314 317parallel
Strand 6
C
339 341parallel
Strand 7
C
366 368parallel
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