Analysis of interatomic Contacts of Structural Units in PDB entry:
7F7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F7L entry

There are 2 chains in PDB entry 7F7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LEU 310
B
 MET 1LEU 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7F7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 39Right-handed alpha
Helix 2
AA2
A
46 50Right-handed 310
Helix 3
AA3
A
51 65Right-handed alpha
Helix 4
AA4
A
69 73Right-handed 310
Helix 5
AA5
A
80 84Right-handed 310
Helix 6
AA6
A
87 101Right-handed alpha
Helix 7
AA7
A
123 125Right-handed 310
Helix 8
AA8
A
131 145Right-handed alpha
Helix 9
AA9
A
157 168Right-handed alpha
Helix 10
AB1
A
185 196Right-handed alpha
Helix 11
AB2
A
210 214Right-handed 310
Helix 12
AB3
A
216 219Right-handed 310
Helix 13
AB4
A
220 231Right-handed alpha
Helix 14
AB5
A
233 245Right-handed alpha
Helix 15
AB6
A
255 262Right-handed alpha
Helix 16
AB7
A
271 276Right-handed alpha
Helix 17
AB8
A
277 281Right-handed 310
Helix 18
AB9
A
289 293Right-handed 310
Helix 19
AC1
A
301 307Right-handed alpha
Helix 20
AC2
B
24 38Right-handed alpha
Helix 21
AC3
B
46 50Right-handed 310
Helix 22
AC4
B
51 66Right-handed alpha
Helix 23
AC5
B
69 73Right-handed 310
Helix 24
AC6
B
80 84Right-handed 310
Helix 25
AC7
B
88 101Right-handed alpha
Helix 26
AC8
B
123 127Right-handed 310
Helix 27
AC9
B
131 145Right-handed alpha
Helix 28
AD1
B
157 166Right-handed alpha
Helix 29
AD2
B
185 196Right-handed alpha
Helix 30
AD3
B
210 214Right-handed 310
Helix 31
AD4
B
216 219Right-handed 310
Helix 32
AD5
B
220 231Right-handed alpha
Helix 33
AD6
B
233 245Right-handed alpha
Helix 34
AD7
B
255 263Right-handed alpha
Helix 35
AD8
B
271 277Right-handed alpha
Helix 36
AD9
B
278 281Right-handed 310
Helix 37
AE1
B
289 293Right-handed 310
Helix 38
AE2
B
301 306Right-handed alpha
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There are 5 sheets in PDB entry 7F7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
12 14anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
42 44parallel
Strand 3
A
74 79parallel
Strand 4
A
107 110parallel
Strand 5
A
151 154parallel
Strand 6
A
174 178parallel
Strand 7
A
198 202parallel
Strand 8
A
248 249parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 116first strand
Strand 2
A
127 128anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
12 14anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 19first strand
Strand 2
B
42 44parallel
Strand 3
B
74 79parallel
Strand 4
B
107 110parallel
Strand 5
B
151 154parallel
Strand 6
B
174 178parallel
Strand 7
B
198 202parallel
Strand 8
B
248 249parallel
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