Analysis of interatomic Contacts of Structural Units in PDB entry:
7F7Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F7Y entry

There are 2 chains in PDB entry 7F7Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 48ASP 379
B
 ASN 48ASP 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 7F7Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
268 274Right-handed 310
Helix 2
AA2
B
268 272Right-handed 310
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There are 10 sheets in PDB entry 7F7Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
186 195anti-parallel
Strand 3
A
172 180anti-parallel
Strand 4
A
139 147anti-parallel
Strand 5
A
79 87anti-parallel
Strand 6
A
107 111anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 125first strand
Strand 2
A
63 69anti-parallel
Strand 3
A
211 221parallel
Strand 4
A
163 166anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 157first strand
Strand 2
A
160 161anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 293first strand
Strand 2
A
280 285anti-parallel
Strand 3
A
312 315anti-parallel
Strand 4
A
242 249anti-parallel
Strand 5
A
370 376parallel
Strand 6
A
335 342anti-parallel
Strand 7
A
345 350anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 307first strand
Strand 2
A
259 266anti-parallel
Strand 3
A
322 328anti-parallel
Strand 4
A
357 364anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
186 195anti-parallel
Strand 3
B
172 180anti-parallel
Strand 4
B
139 147anti-parallel
Strand 5
B
79 88anti-parallel
Strand 6
B
107 111anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 125first strand
Strand 2
B
63 69anti-parallel
Strand 3
B
211 221parallel
Strand 4
B
163 166anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 157first strand
Strand 2
B
160 161anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 293first strand
Strand 2
B
280 285anti-parallel
Strand 3
B
312 315anti-parallel
Strand 4
B
242 249anti-parallel
Strand 5
B
370 376parallel
Strand 6
B
335 342anti-parallel
Strand 7
B
345 353anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 307first strand
Strand 2
B
259 266anti-parallel
Strand 3
B
322 328anti-parallel
Strand 4
B
357 364anti-parallel
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