Analysis of interatomic Contacts of Structural Units in PDB entry:
7F8B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F8B entry

There is 1 chain in PDB entry 7F8B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 13ARG 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7F8B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 31Right-handed alpha
Helix 2
AA2
A
46 52Right-handed alpha
Helix 3
AA3
A
63 78Right-handed alpha
Helix 4
AA4
A
92 96Right-handed 310
Helix 5
AA5
A
113 123Right-handed alpha
Helix 6
AA6
A
136 143Right-handed alpha
Helix 7
AA7
A
149 156Right-handed alpha
Helix 8
AA8
A
168 170Right-handed 310
Helix 9
AA9
A
194 196Right-handed 310
Helix 10
AB1
A
197 210Right-handed alpha
Helix 11
AB2
A
215 222Right-handed alpha
Helix 12
AB3
A
230 235Right-handed alpha
Helix 13
AB4
A
242 246Right-handed 310
Helix 14
AB5
A
247 259Right-handed alpha
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There are 2 sheets in PDB entry 7F8B. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
172 173anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 90first strand
Strand 2
A
57 61parallel
Strand 3
A
36 39parallel
Strand 4
A
103 108parallel
Strand 5
A
127 135parallel
Strand 6
A
180 187anti-parallel
Strand 7
A
159 167anti-parallel
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