Analysis of interatomic Contacts of Structural Units in PDB entry:
7F8N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F8N entry

There are 7 chains in PDB entry 7F8N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 13	SER 356
B	SER 13	SER 356
C	SER 13	SER 356
D	SER 13	SER 356
E	SER 13	SER 356
F	SER 13	SER 356
G	SER 13	SER 356

There are 91 helices in PDB entry 7F8N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	32	60	Right-handed alpha
Helix 2	AA2	A	73	88	Right-handed alpha
Helix 3	AA3	A	100	120	Right-handed alpha
Helix 4	AA4	A	121	131	Right-handed alpha
Helix 5	AA5	A	131	160	Right-handed alpha
Helix 6	AA6	A	194	205	Right-handed alpha
Helix 7	AA7	A	207	237	Right-handed alpha
Helix 8	AA8	A	238	243	Right-handed 310
Helix 9	AA9	A	250	254	Right-handed 310
Helix 10	AB1	A	269	296	Right-handed alpha
Helix 11	AB2	A	306	312	Right-handed 310
Helix 12	AB3	A	326	338	Right-handed alpha
Helix 13	AB4	A	342	354	Right-handed alpha
Helix 14	AB5	B	32	60	Right-handed alpha
Helix 15	AB6	B	73	88	Right-handed alpha
Helix 16	AB7	B	100	120	Right-handed alpha
Helix 17	AB8	B	121	131	Right-handed alpha
Helix 18	AB9	B	131	160	Right-handed alpha
Helix 19	AC1	B	194	205	Right-handed alpha
Helix 20	AC2	B	207	237	Right-handed alpha
Helix 21	AC3	B	238	243	Right-handed 310
Helix 22	AC4	B	250	254	Right-handed 310
Helix 23	AC5	B	269	296	Right-handed alpha
Helix 24	AC6	B	306	312	Right-handed 310
Helix 25	AC7	B	326	338	Right-handed alpha
Helix 26	AC8	B	342	354	Right-handed alpha
Helix 27	AC9	C	32	60	Right-handed alpha
Helix 28	AD1	C	73	88	Right-handed alpha
Helix 29	AD2	C	100	120	Right-handed alpha
Helix 30	AD3	C	121	131	Right-handed alpha
Helix 31	AD4	C	131	160	Right-handed alpha
Helix 32	AD5	C	194	205	Right-handed alpha
Helix 33	AD6	C	207	237	Right-handed alpha
Helix 34	AD7	C	238	243	Right-handed 310
Helix 35	AD8	C	250	254	Right-handed 310
Helix 36	AD9	C	269	296	Right-handed alpha
Helix 37	AE1	C	306	312	Right-handed 310
Helix 38	AE2	C	326	338	Right-handed alpha
Helix 39	AE3	C	342	354	Right-handed alpha
Helix 40	AE4	D	32	60	Right-handed alpha
Helix 41	AE5	D	73	88	Right-handed alpha
Helix 42	AE6	D	100	120	Right-handed alpha
Helix 43	AE7	D	121	131	Right-handed alpha
Helix 44	AE8	D	131	160	Right-handed alpha
Helix 45	AE9	D	194	205	Right-handed alpha
Helix 46	AF1	D	207	237	Right-handed alpha
Helix 47	AF2	D	238	243	Right-handed 310
Helix 48	AF3	D	250	254	Right-handed 310
Helix 49	AF4	D	269	296	Right-handed alpha
Helix 50	AF5	D	306	312	Right-handed 310
Helix 51	AF6	D	326	338	Right-handed alpha
Helix 52	AF7	D	342	354	Right-handed alpha
Helix 53	AF8	E	32	60	Right-handed alpha
Helix 54	AF9	E	73	88	Right-handed alpha
Helix 55	AG1	E	100	120	Right-handed alpha
Helix 56	AG2	E	121	131	Right-handed alpha
Helix 57	AG3	E	131	160	Right-handed alpha
Helix 58	AG4	E	194	205	Right-handed alpha
Helix 59	AG5	E	207	237	Right-handed alpha
Helix 60	AG6	E	238	243	Right-handed 310
Helix 61	AG7	E	250	254	Right-handed 310
Helix 62	AG8	E	269	296	Right-handed alpha
Helix 63	AG9	E	306	312	Right-handed 310
Helix 64	AH1	E	326	338	Right-handed alpha
Helix 65	AH2	E	342	354	Right-handed alpha
Helix 66	AH3	F	32	60	Right-handed alpha
Helix 67	AH4	F	73	88	Right-handed alpha
Helix 68	AH5	F	100	120	Right-handed alpha
Helix 69	AH6	F	121	131	Right-handed alpha
Helix 70	AH7	F	131	160	Right-handed alpha
Helix 71	AH8	F	194	205	Right-handed alpha
Helix 72	AH9	F	207	237	Right-handed alpha
Helix 73	AI1	F	238	243	Right-handed 310
Helix 74	AI2	F	250	254	Right-handed 310
Helix 75	AI3	F	269	296	Right-handed alpha
Helix 76	AI4	F	306	312	Right-handed 310
Helix 77	AI5	F	326	338	Right-handed alpha
Helix 78	AI6	F	342	354	Right-handed alpha
Helix 79	AI7	G	32	60	Right-handed alpha
Helix 80	AI8	G	73	88	Right-handed alpha
Helix 81	AI9	G	100	120	Right-handed alpha
Helix 82	AJ1	G	121	131	Right-handed alpha
Helix 83	AJ2	G	131	160	Right-handed alpha
Helix 84	AJ3	G	194	205	Right-handed alpha
Helix 85	AJ4	G	207	237	Right-handed alpha
Helix 86	AJ5	G	238	243	Right-handed 310
Helix 87	AJ6	G	250	254	Right-handed 310
Helix 88	AJ7	G	269	296	Right-handed alpha
Helix 89	AJ8	G	306	312	Right-handed 310
Helix 90	AJ9	G	326	338	Right-handed alpha
Helix 91	AK1	G	342	354	Right-handed alpha

There are 7 sheets in PDB entry 7F8N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	67	first strand
Strand 2	A	263	267	anti-parallel
Strand 3	A	245	246	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	67	first strand
Strand 2	B	263	267	anti-parallel
Strand 3	B	245	246	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	67	first strand
Strand 2	C	263	267	anti-parallel
Strand 3	C	245	246	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	67	first strand
Strand 2	D	263	267	anti-parallel
Strand 3	D	245	246	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	67	first strand
Strand 2	E	263	267	anti-parallel
Strand 3	E	245	246	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	67	first strand
Strand 2	F	263	267	anti-parallel
Strand 3	F	245	246	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	67	first strand
Strand 2	G	263	267	anti-parallel
Strand 3	G	245	246	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F8N

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F8N