Analysis of interatomic Contacts of Structural Units in PDB entry:
7F8V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F8V entry

There are 5 chains in PDB entry 7F8V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 10	PHE 355
B	ASN 35	ASN 340
C	LYS 29	PHE 61
E	GLY 2	ASP 16
R	ALA 55	CYS 405

There are 23 helices in PDB entry 7F8V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	29	Right-handed alpha
Helix 2	AA2	A	45	52	Right-handed alpha
Helix 3	AA3	A	208	217	Right-handed 310
Helix 4	AA4	A	229	232	Right-handed 310
Helix 5	AA5	A	242	256	Right-handed alpha
Helix 6	AA6	A	257	261	Right-handed 310
Helix 7	AA7	A	271	282	Right-handed alpha
Helix 8	AA8	A	296	310	Right-handed alpha
Helix 9	AA9	A	331	352	Right-handed alpha
Helix 10	AB1	C	30	45	Right-handed alpha
Helix 11	AB2	R	56	81	Right-handed alpha
Helix 12	AB3	R	87	107	Right-handed alpha
Helix 13	AB4	R	107	117	Right-handed alpha
Helix 14	AB5	R	123	157	Right-handed alpha
Helix 15	AB6	R	158	166	Right-handed alpha
Helix 16	AB7	R	167	186	Right-handed alpha
Helix 17	AB8	R	187	192	Right-handed alpha
Helix 18	AB9	R	211	227	Right-handed alpha
Helix 19	AC1	R	227	248	Right-handed alpha
Helix 20	AC2	R	327	360	Right-handed alpha
Helix 21	AC3	R	362	367	Right-handed alpha
Helix 22	AC4	R	369	391	Right-handed alpha
Helix 23	AC5	R	394	405	Right-handed alpha

There are 11 sheets in PDB entry 7F8V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	187	192	first strand
Strand 2	A	195	200	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	227	first strand
Strand 2	A	264	270	parallel
Strand 3	A	320	324	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	51	first strand
Strand 2	B	336	340	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	103	105	first strand
Strand 2	B	111	114	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	176	181	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	260	262	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	276	first strand
Strand 2	B	287	289	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	295	296	first strand
Strand 2	B	306	307	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	197	198	first strand
Strand 2	R	202	203	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F8V

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F8V