Analysis of interatomic Contacts of Structural Units in PDB entry:
7F8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F8X entry

There are 3 chains in PDB entry 7F8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 37GLY 614
C
 ASP 1ASP 1
C
 GLY 4TRP 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7F8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 69Right-handed alpha
Helix 2
AA2
A
74 93Right-handed alpha
Helix 3
AA3
A
95 105Right-handed alpha
Helix 4
AA4
A
110 144Right-handed alpha
Helix 5
AA5
A
154 173Right-handed alpha
Helix 6
AA6
A
174 179Right-handed alpha
Helix 7
AA7
A
202 218Right-handed alpha
Helix 8
AA8
A
218 238Right-handed alpha
Helix 9
AA9
A
241 251Right-handed alpha
Helix 10
AB1
A
277 424Right-handed alpha
Helix 11
AB2
A
433 455Right-handed alpha
Helix 12
AB3
A
457 463Right-handed alpha
Helix 13
AB4
A
466 481Right-handed alpha
Helix 14
AB5
A
481 487Right-handed alpha
Helix 15
AB6
A
488 497Right-handed alpha
Helix 16
AB7
A
499 508Right-handed alpha
Helix 17
AB8
A
510 516Right-handed alpha
Helix 18
AB9
A
516 530Right-handed alpha
Helix 19
AC1
A
537 573Right-handed alpha
Helix 20
AC2
A
573 581Right-handed alpha
Helix 21
AC3
A
584 606Right-handed alpha
Helix 22
AC4
A
607 608Right-handed 310
Helix 23
AC5
A
609 613Right-handed 310
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There are 2 sheets in PDB entry 7F8X. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 186first strand
Strand 2
A
192 198anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 258first strand
Strand 2
A
264 267anti-parallel
Strand 3
A
270 273anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il