Analysis of interatomic Contacts of Structural Units in PDB entry:
7F9K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F9K entry

There is 1 chain in PDB entry 7F9K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 161ALA 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 7F9K. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
161 207Right-handed alpha
Helix 2
AA2
A
217 224Right-handed alpha
Helix 3
AA3
A
228 244Right-handed alpha
Helix 4
AA4
A
252 255Right-handed 310
Helix 5
AA5
A
256 261Right-handed alpha
Helix 6
AA6
A
273 319Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7F9K.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
211 212first strand
Strand 2
A
215 216anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il