Analysis of interatomic Contacts of Structural Units in PDB entry:
7F9L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7F9L entry

There are 12 chains in PDB entry 7F9L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 157	ALA 318
B	GLY 157	ALA 318
C	ILE 159	ALA 318
D	GLY 157	ALA 318
E	ILE 159	ALA 318
F	GLY 157	ALA 318
G	ASP 25	ALA 123
H	ASP 25	ALA 123
I	ASP 25	ALA 123
J	ASP 25	ALA 123
K	ASP 25	LYS 121
L	LEU 26	GLU 122

There are 34 helices in PDB entry 7F9L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	157	207	Right-handed alpha
Helix 2	AA2	A	217	224	Right-handed alpha
Helix 3	AA3	A	228	242	Right-handed alpha
Helix 4	AA4	A	255	261	Right-handed alpha
Helix 5	AA5	A	273	316	Right-handed alpha
Helix 6	AA6	B	158	208	Right-handed alpha
Helix 7	AA7	B	217	224	Right-handed alpha
Helix 8	AA8	B	228	244	Right-handed alpha
Helix 9	AA9	B	253	255	Right-handed 310
Helix 10	AB1	B	256	261	Right-handed alpha
Helix 11	AB2	B	273	316	Right-handed alpha
Helix 12	AB3	C	161	206	Right-handed alpha
Helix 13	AB4	C	217	224	Right-handed alpha
Helix 14	AB5	C	228	242	Right-handed alpha
Helix 15	AB6	C	252	255	Right-handed 310
Helix 16	AB7	C	256	261	Right-handed alpha
Helix 17	AB8	C	273	316	Right-handed alpha
Helix 18	AB9	D	160	206	Right-handed alpha
Helix 19	AC1	D	217	224	Right-handed alpha
Helix 20	AC2	D	228	244	Right-handed alpha
Helix 21	AC3	D	255	261	Right-handed alpha
Helix 22	AC4	D	273	316	Right-handed alpha
Helix 23	AC5	E	161	206	Right-handed alpha
Helix 24	AC6	E	217	224	Right-handed alpha
Helix 25	AC7	E	228	244	Right-handed alpha
Helix 26	AC8	E	255	261	Right-handed alpha
Helix 27	AC9	E	273	317	Right-handed alpha
Helix 28	AD1	F	158	206	Right-handed alpha
Helix 29	AD2	F	217	224	Right-handed alpha
Helix 30	AD3	F	228	242	Right-handed alpha
Helix 31	AD4	F	255	261	Right-handed alpha
Helix 32	AD5	F	273	316	Right-handed alpha
Helix 33	AD6	H	92	96	Right-handed 310
Helix 34	AD7	L	92	96	Right-handed 310

There are 24 sheets in PDB entry 7F9L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	211	212	first strand
Strand 2	A	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	211	212	first strand
Strand 2	B	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	211	212	first strand
Strand 2	C	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	211	212	first strand
Strand 2	D	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	211	212	first strand
Strand 2	E	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	211	212	first strand
Strand 2	F	215	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	34	first strand
Strand 2	G	45	52	anti-parallel
Strand 3	G	81	88	anti-parallel
Strand 4	G	75	78	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	38	40	first strand
Strand 2	G	116	121	parallel
Strand 3	G	97	105	anti-parallel
Strand 4	G	57	61	anti-parallel
Strand 5	G	68	71	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	38	40	first strand
Strand 2	G	116	121	parallel
Strand 3	G	97	105	anti-parallel
Strand 4	G	108	109	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	34	first strand
Strand 2	H	45	51	anti-parallel
Strand 3	H	82	88	anti-parallel
Strand 4	H	75	76	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	38	40	first strand
Strand 2	H	116	121	parallel
Strand 3	H	97	105	anti-parallel
Strand 4	H	57	61	anti-parallel
Strand 5	H	68	71	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	38	40	first strand
Strand 2	H	116	121	parallel
Strand 3	H	97	105	anti-parallel
Strand 4	H	108	109	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	30	34	first strand
Strand 2	I	45	51	anti-parallel
Strand 3	I	81	88	anti-parallel
Strand 4	I	75	78	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	38	40	first strand
Strand 2	I	116	121	parallel
Strand 3	I	97	105	anti-parallel
Strand 4	I	57	61	anti-parallel
Strand 5	I	68	71	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	38	40	first strand
Strand 2	I	116	121	parallel
Strand 3	I	97	105	anti-parallel
Strand 4	I	108	109	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	30	34	first strand
Strand 2	J	45	52	anti-parallel
Strand 3	J	81	88	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	38	40	first strand
Strand 2	J	116	121	parallel
Strand 3	J	97	105	anti-parallel
Strand 4	J	57	62	anti-parallel
Strand 5	J	68	71	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	38	40	first strand
Strand 2	J	116	121	parallel
Strand 3	J	97	105	anti-parallel
Strand 4	J	108	109	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	30	34	first strand
Strand 2	K	45	52	anti-parallel
Strand 3	K	81	88	anti-parallel
Strand 4	K	75	78	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	38	40	first strand
Strand 2	K	119	121	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	68	71	first strand
Strand 2	K	57	61	anti-parallel
Strand 3	K	102	105	anti-parallel
Strand 4	K	108	109	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	38	40	first strand
Strand 2	L	116	121	parallel
Strand 3	L	97	99	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	52	first strand
Strand 2	L	81	88	anti-parallel
Strand 3	L	75	78	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	70	71	first strand
Strand 2	L	57	59	anti-parallel
Strand 3	L	102	105	anti-parallel
Strand 4	L	108	109	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7F9L

Analysis of interatomic Contacts of Structural Units in PDB entry:
7F9L