Analysis of interatomic Contacts of Structural Units in PDB entry:
7F9X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7F9X entry

There is 1 chain in PDB entry 7F9X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 296ARG 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 7F9X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
297 301Right-handed 310
Helix 2
AA2
A
303 322Right-handed alpha
Helix 3
AA3
A
325 335Right-handed alpha
Helix 4
AA4
A
336 340Right-handed 310
Helix 5
AA5
A
341 348Right-handed alpha
Helix 6
AA6
A
354 383Right-handed alpha
Helix 7
AA7
A
388 394Right-handed alpha
Helix 8
AA8
A
394 406Right-handed alpha
Helix 9
AA9
A
407 411Right-handed 310
Helix 10
AB1
A
421 430Right-handed alpha
Helix 11
AB2
A
441 454Right-handed alpha
Helix 12
AB3
A
473 480Right-handed alpha
Helix 13
AB4
A
481 484Right-handed 310
Helix 14
AB5
A
490 502Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7F9X.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
503 508first strand
Strand 2
A
524 531parallel
Strand 3
A
535 538anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il