Analysis of interatomic Contacts of Structural Units in PDB entry:
7FA1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FA1 entry

There is 1 chain in PDB entry 7FA1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 2ARG 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7FA1. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
19 29Right-handed alpha
Helix 2
AA2
A
35 46Right-handed alpha
Helix 3
AA3
A
47 51Right-handed 310
Helix 4
AA4
A
69 73Right-handed 310
Helix 5
AA5
A
74 76Right-handed 310
Helix 6
AA6
A
115 123Right-handed alpha
Helix 7
AA7
A
129 133Right-handed 310
Helix 8
AA8
A
191 196Right-handed alpha
Helix 9
AA9
A
204 213Right-handed alpha
Helix 10
AB1
A
264 274Right-handed alpha
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There are 3 sheets in PDB entry 7FA1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
6 8first strand
Strand 2
A
58 65parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
100 104anti-parallel
Strand 5
A
241 251anti-parallel
Strand 6
A
185 190anti-parallel
Strand 7
A
134 135parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
6 8first strand
Strand 2
A
58 65parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
100 104anti-parallel
Strand 5
A
241 251anti-parallel
Strand 6
A
230 238anti-parallel
Strand 7
A
222 227anti-parallel
Strand 8
A
217 219anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
168 170first strand
Strand 2
A
159 161anti-parallel
Strand 3
A
150 155anti-parallel
Strand 4
A
138 143anti-parallel
Strand 5
A
176 177anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il