Analysis of interatomic Contacts of Structural Units in PDB entry:
7FAP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FAP entry

There is 1 chain in PDB entry 7FAP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 23ASP 1976
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 7FAP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 27Right-handed 310
Helix 2
AA2
A
74 78Right-handed 310
Helix 3
AA3
A
106 111Right-handed alpha
Helix 4
AA4
A
118 140Right-handed alpha
Helix 5
AA5
A
146 166Right-handed alpha
Helix 6
AA6
A
178 192Right-handed alpha
Helix 7
AA7
A
206 217Right-handed alpha
Helix 8
AA8
A
217 226Right-handed alpha
Helix 9
AA9
A
273 297Right-handed alpha
Helix 10
AB1
A
319 332Right-handed alpha
Helix 11
AB2
A
333 338Right-handed alpha
Helix 12
AB3
A
338 343Right-handed alpha
Helix 13
AB4
A
581 586Right-handed alpha
Helix 14
AB5
A
598 602Right-handed 310
Helix 15
AB6
A
608 627Right-handed alpha
Helix 16
AB7
A
631 636Right-handed 310
Helix 17
AB8
A
639 659Right-handed alpha
Helix 18
AB9
A
667 683Right-handed alpha
Helix 19
AC1
A
704 722Right-handed alpha
Helix 20
AC2
A
755 782Right-handed alpha
Helix 21
AC3
A
800 813Right-handed alpha
Helix 22
AC4
A
825 847Right-handed alpha
Helix 23
AC5
A
872 884Right-handed alpha
Helix 24
AC6
A
887 896Right-handed alpha
Helix 25
AC7
A
943 945Right-handed 310
Helix 26
AC8
A
950 954Right-handed 310
Helix 27
AC9
A
961 966Right-handed alpha
Helix 28
AD1
A
1016 1041Right-handed alpha
Helix 29
AD2
A
1084 1118Right-handed alpha
Helix 30
AD3
A
1131 1148Right-handed alpha
Helix 31
AD4
A
1163 1171Right-handed alpha
Helix 32
AD5
A
1177 1199Right-handed alpha
Helix 33
AD6
A
1257 1261Right-handed 310
Helix 34
AD7
A
1295 1308Right-handed alpha
Helix 35
AD8
A
1337 1353Right-handed alpha
Helix 36
AD9
A
1364 1375Right-handed alpha
Helix 37
AE1
A
1396 1420Right-handed alpha
Helix 38
AE2
A
1450 1468Right-handed alpha
Helix 39
AE3
A
1482 1503Right-handed alpha
Helix 40
AE4
A
1505 1509Right-handed 310
Helix 41
AE5
A
1534 1538Right-handed 310
Helix 42
AE6
A
1540 1547Right-handed alpha
Helix 43
AE7
A
1607 1612Right-handed alpha
Helix 44
AE8
A
1617 1625Right-handed alpha
Helix 45
AE9
A
1634 1659Right-handed alpha
Helix 46
AF1
A
1662 1684Right-handed alpha
Helix 47
AF2
A
1692 1706Right-handed alpha
Helix 48
AF3
A
1716 1726Right-handed alpha
Helix 49
AF4
A
1746 1763Right-handed alpha
Helix 50
AF5
A
1788 1816Right-handed alpha
Helix 51
AF6
A
1831 1860Right-handed alpha
Helix 52
AF7
A
1882 1889Right-handed alpha
Helix 53
AF8
A
1909 1914Right-handed alpha
Helix 54
AF9
A
1953 1971Right-handed alpha
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There are 2 sheets in PDB entry 7FAP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
569 570first strand
Strand 2
A
663 664anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
911 912first strand
Strand 2
A
940 941anti-parallel
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