Analysis of interatomic Contacts of Structural Units in PDB entry:
7FBG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7FBG entry

There is 1 chain in PDB entry 7FBG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LYS 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7FBG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 18Right-handed 310
Helix 2
AA2
A
36 40Right-handed 310
Helix 3
AA3
A
51 67Right-handed alpha
Helix 4
AA4
A
69 71Right-handed 310
Helix 5
AA5
A
88 92Right-handed 310
Helix 6
AA6
A
98 102Right-handed 310
Helix 7
AA7
A
133 136Right-handed 310
Helix 8
AA8
A
144 150Right-handed alpha
Helix 9
AA9
A
151 163Right-handed alpha
Helix 10
AB1
A
166 170Right-handed 310
Helix 11
AB2
A
186 197Right-handed alpha
Helix 12
AB3
A
214 226Right-handed alpha
Helix 13
AB4
A
229 231Right-handed 310
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There are 3 sheets in PDB entry 7FBG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
11 13anti-parallel
Strand 3
A
23 28anti-parallel
Strand 4
A
260 266anti-parallel
Strand 5
A
117 122anti-parallel
Strand 6
A
73 74parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
108 111parallel
Strand 3
A
137 143anti-parallel
Strand 4
A
126 132anti-parallel
Strand 5
A
171 174anti-parallel
Strand 6
A
233 235parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 185first strand
Strand 2
A
210 213anti-parallel
Strand 3
A
203 207anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il